Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PKNOX1P55347 AC002075.2-201ENST00000425207 252 ntBASIC3.71□□□□□ -1.82
PKNOX1P55347 AL031736.2-201ENST00000426573 787 ntBASIC3.71□□□□□ -1.82
PKNOX1P55347 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.71□□□□□ -1.82
PKNOX1P55347 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.71□□□□□ -1.82
PKNOX1P55347 BMS1P19-201ENST00000433925 393 ntBASIC3.71□□□□□ -1.82
PKNOX1P55347 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.71□□□□□ -1.82
PKNOX1P55347 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.71□□□□□ -1.82
PKNOX1P55347 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.71□□□□□ -1.82
PKNOX1P55347 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
PKNOX1P55347 RPS23P7-201ENST00000466210 444 ntBASIC3.71□□□□□ -1.82
PKNOX1P55347 NPM1P17-201ENST00000479221 602 ntBASIC3.71□□□□□ -1.82
PKNOX1P55347 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PKNOX1P55347 RPL30P11-201ENST00000495304 339 ntBASIC3.71□□□□□ -1.82
PKNOX1P55347 AC111193.1-201ENST00000504097 155 ntBASIC3.71□□□□□ -1.82
PKNOX1P55347 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.71□□□□□ -1.82
PKNOX1P55347 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.71□□□□□ -1.82
PKNOX1P55347 SNORA31.9-201ENST00000516429 84 ntBASIC3.71□□□□□ -1.82
PKNOX1P55347 RNA5SP164-201ENST00000516533 110 ntBASIC3.71□□□□□ -1.82
PKNOX1P55347 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.71□□□□□ -1.82
PKNOX1P55347 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.71□□□□□ -1.82
PKNOX1P55347 C1GALT1P3-201ENST00000522049 819 ntBASIC3.71□□□□□ -1.82
PKNOX1P55347 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.71□□□□□ -1.82
PKNOX1P55347 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
PKNOX1P55347 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.71□□□□□ -1.82
PKNOX1P55347 POLR2KP1-201ENST00000553226 168 ntBASIC3.71□□□□□ -1.82
PKNOX1P55347 AC025884.1-201ENST00000556034 378 ntBASIC3.71□□□□□ -1.82
PKNOX1P55347 LINC00557-201ENST00000563184 1279 ntBASIC3.71□□□□□ -1.82
PKNOX1P55347 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.71□□□□□ -1.82
PKNOX1P55347 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
PKNOX1P55347 AC023043.4-201ENST00000612081 449 ntBASIC3.71□□□□□ -1.82
PKNOX1P55347 AP006248.3-201ENST00000623580 594 ntBASIC3.71□□□□□ -1.82
PKNOX1P55347 AC073530.2-201ENST00000623987 261 ntBASIC3.71□□□□□ -1.82
PKNOX1P55347 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PKNOX1P55347 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.71□□□□□ -1.82
PKNOX1P55347 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.71□□□□□ -1.82
PKNOX1P55347 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.71□□□□□ -1.82
PKNOX1P55347 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
PKNOX1P55347 AC073073.2-201ENST00000609827 2578 ntBASIC3.7□□□□□ -1.82
PKNOX1P55347 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PKNOX1P55347 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PKNOX1P55347 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.7□□□□□ -1.82
PKNOX1P55347 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.7□□□□□ -1.82
PKNOX1P55347 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
PKNOX1P55347 RPS26P8-201ENST00000393490 348 ntBASIC3.7□□□□□ -1.82
PKNOX1P55347 AL022722.2-201ENST00000402519 180 ntBASIC3.7□□□□□ -1.82
PKNOX1P55347 VTA1P1-201ENST00000414044 866 ntBASIC3.7□□□□□ -1.82
PKNOX1P55347 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.7□□□□□ -1.82
PKNOX1P55347 AC017083.1-201ENST00000428093 483 ntBASIC3.7□□□□□ -1.82
PKNOX1P55347 USP9YP7-201ENST00000436723 430 ntBASIC3.7□□□□□ -1.82
PKNOX1P55347 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.7□□□□□ -1.82
PKNOX1P55347 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.7□□□□□ -1.82
PKNOX1P55347 USP9YP32-201ENST00000452432 430 ntBASIC3.7□□□□□ -1.82
PKNOX1P55347 NANOGP10-201ENST00000453325 895 ntBASIC3.7□□□□□ -1.82
PKNOX1P55347 FTH1P24-201ENST00000503502 462 ntBASIC3.7□□□□□ -1.82
PKNOX1P55347 NDUFB4P9-201ENST00000511646 388 ntBASIC3.7□□□□□ -1.82
PKNOX1P55347 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.7□□□□□ -1.82
PKNOX1P55347 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.7□□□□□ -1.82
PKNOX1P55347 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.7□□□□□ -1.82
PKNOX1P55347 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC3.7□□□□□ -1.82
PKNOX1P55347 OR5AK3P-201ENST00000527486 1297 ntBASIC3.7□□□□□ -1.82
PKNOX1P55347 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.7□□□□□ -1.82
PKNOX1P55347 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.7□□□□□ -1.82
PKNOX1P55347 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.7□□□□□ -1.82
PKNOX1P55347 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.7□□□□□ -1.82
PKNOX1P55347 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.7□□□□□ -1.82
PKNOX1P55347 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PKNOX1P55347 AC079610.2-201ENST00000604818 690 ntBASIC3.7□□□□□ -1.82
PKNOX1P55347 KATNBL1P5-201ENST00000605015 517 ntBASIC3.7□□□□□ -1.82
PKNOX1P55347 AC010680.4-201ENST00000605334 543 ntBASIC3.7□□□□□ -1.82
PKNOX1P55347 AL021368.1-201ENST00000607490 540 ntBASIC3.7□□□□□ -1.82
PKNOX1P55347 AL354760.1-201ENST00000608357 643 ntBASIC3.7□□□□□ -1.82
PKNOX1P55347 MIR6867-201ENST00000610636 67 ntBASIC3.7□□□□□ -1.82
PKNOX1P55347 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.7□□□□□ -1.82
PKNOX1P55347 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.7□□□□□ -1.82
PKNOX1P55347 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
PKNOX1P55347 AF001550.2-201ENST00000636643 217 ntBASIC3.7□□□□□ -1.82
PKNOX1P55347 RLIMP1-201ENST00000339626 1680 ntBASIC3.7□□□□□ -1.82
PKNOX1P55347 TNPO1P3-201ENST00000436471 2662 ntBASIC3.7□□□□□ -1.82
PKNOX1P55347 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
PKNOX1P55347 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.7□□□□□ -1.82
PKNOX1P55347 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.7□□□□□ -1.82
PKNOX1P55347 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.7□□□□□ -1.82
PKNOX1P55347 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.69□□□□□ -1.82
PKNOX1P55347 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
PKNOX1P55347 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
PKNOX1P55347 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.69□□□□□ -1.82
PKNOX1P55347 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
PKNOX1P55347 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
PKNOX1P55347 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PKNOX1P55347 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.69□□□□□ -1.82
PKNOX1P55347 RNU6-1005P-201ENST00000384519 107 ntBASIC3.69□□□□□ -1.82
PKNOX1P55347 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
PKNOX1P55347 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.69□□□□□ -1.82
PKNOX1P55347 AC136624.1-201ENST00000400791 413 ntBASIC3.69□□□□□ -1.82
PKNOX1P55347 ZNF602P-201ENST00000405929 924 ntBASIC3.69□□□□□ -1.82
PKNOX1P55347 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.69□□□□□ -1.82
PKNOX1P55347 AC073508.1-201ENST00000428866 656 ntBASIC3.69□□□□□ -1.82
PKNOX1P55347 Z74696.2-201ENST00000436514 498 ntBASIC3.69□□□□□ -1.82
PKNOX1P55347 ELOCP11-201ENST00000436690 332 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms