Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LIM2P55344 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LIM2P55344 AL139811.1-201ENST00000424779 2299 ntBASIC3.68□□□□□ -1.82
LIM2P55344 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.68□□□□□ -1.82
LIM2P55344 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.67□□□□□ -1.82
LIM2P55344 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.67□□□□□ -1.82
LIM2P55344 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.67□□□□□ -1.82
LIM2P55344 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.67□□□□□ -1.82
LIM2P55344 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.67□□□□□ -1.82
LIM2P55344 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LIM2P55344 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
LIM2P55344 RNU1-87P-201ENST00000363727 170 ntBASIC3.67□□□□□ -1.82
LIM2P55344 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
LIM2P55344 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.67□□□□□ -1.82
LIM2P55344 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.67□□□□□ -1.82
LIM2P55344 RNU6-1005P-201ENST00000384519 107 ntBASIC3.67□□□□□ -1.82
LIM2P55344 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
LIM2P55344 AC136624.1-201ENST00000400791 413 ntBASIC3.67□□□□□ -1.82
LIM2P55344 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.67□□□□□ -1.82
LIM2P55344 AL450992.3-201ENST00000413192 568 ntBASIC3.67□□□□□ -1.82
LIM2P55344 BX664727.1-201ENST00000416024 466 ntBASIC3.67□□□□□ -1.82
LIM2P55344 AC234782.4-201ENST00000417646 1048 ntBASIC3.67□□□□□ -1.82
LIM2P55344 AP000949.1-201ENST00000438328 629 ntBASIC3.67□□□□□ -1.82
LIM2P55344 RPS7P5-201ENST00000441482 581 ntBASIC3.67□□□□□ -1.82
LIM2P55344 AL357520.1-201ENST00000441557 453 ntBASIC3.67□□□□□ -1.82
LIM2P55344 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.67□□□□□ -1.82
LIM2P55344 HMGB1P16-201ENST00000447155 540 ntBASIC3.67□□□□□ -1.82
LIM2P55344 HMGB3P21-201ENST00000452483 547 ntBASIC3.67□□□□□ -1.82
LIM2P55344 VN1R105P-201ENST00000486595 910 ntBASIC3.67□□□□□ -1.82
LIM2P55344 AL035404.1-201ENST00000497982 568 ntBASIC3.67□□□□□ -1.82
LIM2P55344 AC023050.1-201ENST00000498198 304 ntBASIC3.67□□□□□ -1.82
LIM2P55344 AC002456.2-201ENST00000509356 380 ntBASIC3.67□□□□□ -1.82
LIM2P55344 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.67□□□□□ -1.82
LIM2P55344 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.67□□□□□ -1.82
LIM2P55344 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.67□□□□□ -1.82
LIM2P55344 PDCD5P1-201ENST00000543528 309 ntBASIC3.67□□□□□ -1.82
LIM2P55344 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC3.67□□□□□ -1.82
LIM2P55344 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.67□□□□□ -1.82
LIM2P55344 ATP5F1P7-201ENST00000567330 760 ntBASIC3.67□□□□□ -1.82
LIM2P55344 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.67□□□□□ -1.82
LIM2P55344 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LIM2P55344 AC005255.1-201ENST00000593748 216 ntBASIC3.67□□□□□ -1.82
LIM2P55344 AC020914.4-201ENST00000597690 277 ntBASIC3.67□□□□□ -1.82
LIM2P55344 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LIM2P55344 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.67□□□□□ -1.82
LIM2P55344 VN1R9P-201ENST00000614184 867 ntBASIC3.67□□□□□ -1.82
LIM2P55344 AC073569.3-201ENST00000619055 682 ntBASIC3.67□□□□□ -1.82
LIM2P55344 AP000943.4-201ENST00000622912 357 ntBASIC3.67□□□□□ -1.82
LIM2P55344 AC068880.4-201ENST00000623082 495 ntBASIC3.67□□□□□ -1.82
LIM2P55344 AP002371.2-201ENST00000624450 503 ntBASIC3.67□□□□□ -1.82
LIM2P55344 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LIM2P55344 AL049555.1-201ENST00000562834 1933 ntBASIC3.67□□□□□ -1.82
LIM2P55344 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LIM2P55344 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LIM2P55344 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LIM2P55344 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.67□□□□□ -1.82
LIM2P55344 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LIM2P55344 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
LIM2P55344 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LIM2P55344 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LIM2P55344 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LIM2P55344 NSRP1P1-201ENST00000444067 1693 ntBASIC3.66□□□□□ -1.82
LIM2P55344 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
LIM2P55344 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.66□□□□□ -1.82
LIM2P55344 SNORA51.12-201ENST00000384448 134 ntBASIC3.66□□□□□ -1.82
LIM2P55344 MIR199A2-201ENST00000385289 110 ntBASIC3.66□□□□□ -1.82
LIM2P55344 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LIM2P55344 HMGB3P18-201ENST00000406327 590 ntBASIC3.66□□□□□ -1.82
LIM2P55344 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.66□□□□□ -1.82
LIM2P55344 AL031736.2-201ENST00000426573 787 ntBASIC3.66□□□□□ -1.82
LIM2P55344 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LIM2P55344 UBE2V1P6-201ENST00000430840 422 ntBASIC3.66□□□□□ -1.82
LIM2P55344 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LIM2P55344 TPTE2P6-202ENST00000445572 1007 ntBASIC3.66□□□□□ -1.82
LIM2P55344 AL500522.2-201ENST00000448562 343 ntBASIC3.66□□□□□ -1.82
LIM2P55344 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.66□□□□□ -1.82
LIM2P55344 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.66□□□□□ -1.82
LIM2P55344 OR9M1P-201ENST00000459641 921 ntBASIC3.66□□□□□ -1.82
LIM2P55344 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.66□□□□□ -1.82
LIM2P55344 AC008565.1-201ENST00000509046 885 ntBASIC3.66□□□□□ -1.82
LIM2P55344 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.66□□□□□ -1.82
LIM2P55344 MTND1P36-201ENST00000522384 936 ntBASIC3.66□□□□□ -1.82
LIM2P55344 C1DP5-201ENST00000525775 383 ntBASIC3.66□□□□□ -1.82
LIM2P55344 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LIM2P55344 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.66□□□□□ -1.82
LIM2P55344 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.66□□□□□ -1.82
LIM2P55344 HNRNPCP4-201ENST00000571636 900 ntBASIC3.66□□□□□ -1.82
LIM2P55344 RN7SL703P-201ENST00000578485 302 ntBASIC3.66□□□□□ -1.82
LIM2P55344 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.66□□□□□ -1.82
LIM2P55344 AL158211.2-201ENST00000607282 395 ntBASIC3.66□□□□□ -1.82
LIM2P55344 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.66□□□□□ -1.82
LIM2P55344 AC008759.3-201ENST00000613300 508 ntBASIC3.66□□□□□ -1.82
LIM2P55344 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.66□□□□□ -1.82
LIM2P55344 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.66□□□□□ -1.82
LIM2P55344 AP003400.6-201ENST00000624698 740 ntBASIC3.66□□□□□ -1.82
LIM2P55344 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.66□□□□□ -1.82
LIM2P55344 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.66□□□□□ -1.82
LIM2P55344 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.66□□□□□ -1.82
LIM2P55344 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LIM2P55344 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms