Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 HMGB3P9-201ENST00000441799 583 ntBASIC4.09□□□□□ -1.76
NUP98P52948 AP001992.1-205ENST00000462248 379 ntBASIC4.09□□□□□ -1.76
NUP98P52948 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.09□□□□□ -1.76
NUP98P52948 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.09□□□□□ -1.76
NUP98P52948 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.09□□□□□ -1.76
NUP98P52948 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.09□□□□□ -1.76
NUP98P52948 AL121603.1-201ENST00000553815 142 ntBASIC4.09□□□□□ -1.76
NUP98P52948 EIF4BP1-201ENST00000554881 351 ntBASIC4.09□□□□□ -1.76
NUP98P52948 HMGB1P50-201ENST00000605814 607 ntBASIC4.09□□□□□ -1.76
NUP98P52948 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.09□□□□□ -1.76
NUP98P52948 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.09□□□□□ -1.76
NUP98P52948 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.09□□□□□ -1.76
NUP98P52948 AC073869.7-201ENST00000640874 297 ntBASIC4.09□□□□□ -1.76
NUP98P52948 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.76
NUP98P52948 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NUP98P52948 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NUP98P52948 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
NUP98P52948 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
NUP98P52948 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NUP98P52948 SNORD67-201ENST00000390833 111 ntBASIC4.08□□□□□ -1.76
NUP98P52948 AC004552.1-201ENST00000419089 348 ntBASIC4.08□□□□□ -1.76
NUP98P52948 AL353678.1-201ENST00000422735 741 ntBASIC4.08□□□□□ -1.76
NUP98P52948 AL139132.1-201ENST00000431587 344 ntBASIC4.08□□□□□ -1.76
NUP98P52948 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.08□□□□□ -1.76
NUP98P52948 AC090543.2-201ENST00000483963 348 ntBASIC4.08□□□□□ -1.76
NUP98P52948 AC011825.1-201ENST00000484967 388 ntBASIC4.08□□□□□ -1.76
NUP98P52948 AC068724.1-201ENST00000487100 792 ntBASIC4.08□□□□□ -1.76
NUP98P52948 AC096576.1-201ENST00000489014 359 ntBASIC4.08□□□□□ -1.76
NUP98P52948 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.08□□□□□ -1.76
NUP98P52948 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NUP98P52948 AC006272.2-201ENST00000594725 163 ntBASIC4.08□□□□□ -1.76
NUP98P52948 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NUP98P52948 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NUP98P52948 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
NUP98P52948 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
NUP98P52948 SCN1A-220ENST00000641603 12506 ntBASIC4.07□□□□□ -1.76
NUP98P52948 RNU6-283P-201ENST00000364788 107 ntBASIC4.07□□□□□ -1.76
NUP98P52948 AC012065.2-201ENST00000421295 375 ntBASIC4.07□□□□□ -1.76
NUP98P52948 MTND2P25-201ENST00000449028 610 ntBASIC4.07□□□□□ -1.76
NUP98P52948 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NUP98P52948 KCTD9P6-201ENST00000522306 950 ntBASIC4.07□□□□□ -1.76
NUP98P52948 PSMA2P1-201ENST00000526365 646 ntBASIC4.07□□□□□ -1.76
NUP98P52948 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
NUP98P52948 MIMT1-201ENST00000597105 1050 ntBASIC4.07□□□□□ -1.76
NUP98P52948 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NUP98P52948 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.07□□□□□ -1.76
NUP98P52948 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.07□□□□□ -1.76
NUP98P52948 Y_RNA.111-201ENST00000363248 100 ntBASIC4.07□□□□□ -1.76
NUP98P52948 Y_RNA.510-201ENST00000384511 114 ntBASIC4.07□□□□□ -1.76
NUP98P52948 SNORA44-201ENST00000384584 132 ntBASIC4.07□□□□□ -1.76
NUP98P52948 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.07□□□□□ -1.76
NUP98P52948 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NUP98P52948 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.07□□□□□ -1.76
NUP98P52948 NARSP2-201ENST00000518524 679 ntBASIC4.07□□□□□ -1.76
NUP98P52948 SETP1-201ENST00000556014 845 ntBASIC4.07□□□□□ -1.76
NUP98P52948 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.07□□□□□ -1.76
NUP98P52948 uc_338.25-201ENST00000613756 156 ntBASIC4.07□□□□□ -1.76
NUP98P52948 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.07□□□□□ -1.76
NUP98P52948 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NUP98P52948 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NUP98P52948 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
NUP98P52948 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
NUP98P52948 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
NUP98P52948 OR4G1P-202ENST00000641173 1788 ntBASIC4.06□□□□□ -1.76
NUP98P52948 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.06□□□□□ -1.76
NUP98P52948 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.06□□□□□ -1.76
NUP98P52948 AC011242.1-201ENST00000433596 1158 ntBASIC4.06□□□□□ -1.76
NUP98P52948 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.06□□□□□ -1.76
NUP98P52948 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.06□□□□□ -1.76
NUP98P52948 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.06□□□□□ -1.76
NUP98P52948 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.06□□□□□ -1.76
NUP98P52948 UBL5P2-201ENST00000583788 219 ntBASIC4.06□□□□□ -1.76
NUP98P52948 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.06□□□□□ -1.76
NUP98P52948 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.06□□□□□ -1.76
NUP98P52948 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
NUP98P52948 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.06□□□□□ -1.76
NUP98P52948 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.06□□□□□ -1.76
NUP98P52948 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.05□□□□□ -1.76
NUP98P52948 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NUP98P52948 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.05□□□□□ -1.76
NUP98P52948 RNU6-729P-201ENST00000384399 107 ntBASIC4.05□□□□□ -1.76
NUP98P52948 EEF1A1P41-201ENST00000414667 207 ntBASIC4.05□□□□□ -1.76
NUP98P52948 OR4K6P-201ENST00000416478 897 ntBASIC4.05□□□□□ -1.76
NUP98P52948 AC236972.1-201ENST00000433225 199 ntBASIC4.05□□□□□ -1.76
NUP98P52948 AL831737.1-201ENST00000441288 271 ntBASIC4.05□□□□□ -1.76
NUP98P52948 RPL7P48-201ENST00000461513 746 ntBASIC4.05□□□□□ -1.76
NUP98P52948 GOLGA5P1-201ENST00000507317 980 ntBASIC4.05□□□□□ -1.76
NUP98P52948 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.05□□□□□ -1.76
NUP98P52948 AC005242.1-201ENST00000585658 438 ntBASIC4.05□□□□□ -1.76
NUP98P52948 MIR6852-201ENST00000621699 66 ntBASIC4.05□□□□□ -1.76
NUP98P52948 AC244205.2-202ENST00000635781 342 ntBASIC4.05□□□□□ -1.76
NUP98P52948 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
NUP98P52948 FAM35DP-201ENST00000323387 2712 ntBASIC4.05□□□□□ -1.76
NUP98P52948 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NUP98P52948 AC019072.1-201ENST00000604535 1551 ntBASIC4.05□□□□□ -1.76
NUP98P52948 ZNF807-201ENST00000328088 1707 ntBASIC4.05□□□□□ -1.76
NUP98P52948 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NUP98P52948 ETF1P3-201ENST00000430422 1160 ntBASIC4.05□□□□□ -1.76
NUP98P52948 FTLP19-201ENST00000433300 394 ntBASIC4.05□□□□□ -1.76
NUP98P52948 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms