Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AL513175.1-201ENST00000431492 780 ntBASIC6.19□□□□□ -1.42
USP11P51784 AC138761.5-201ENST00000433967 325 ntBASIC6.19□□□□□ -1.42
USP11P51784 AC002486.1-201ENST00000435098 391 ntBASIC6.19□□□□□ -1.42
USP11P51784 NDUFB4P8-201ENST00000435351 367 ntBASIC6.19□□□□□ -1.42
USP11P51784 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC6.19□□□□□ -1.42
USP11P51784 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC6.19□□□□□ -1.42
USP11P51784 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
USP11P51784 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.19□□□□□ -1.42
USP11P51784 AC048346.1-201ENST00000510247 144 ntBASIC6.19□□□□□ -1.42
USP11P51784 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
USP11P51784 AC010486.1-201ENST00000511793 424 ntBASIC6.19□□□□□ -1.42
USP11P51784 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.19□□□□□ -1.42
USP11P51784 RNU6-885P-201ENST00000516607 104 ntBASIC6.19□□□□□ -1.42
USP11P51784 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.19□□□□□ -1.42
USP11P51784 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.19□□□□□ -1.42
USP11P51784 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.19□□□□□ -1.42
USP11P51784 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC6.19□□□□□ -1.42
USP11P51784 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC6.19□□□□□ -1.42
USP11P51784 BNIP3P22-201ENST00000593399 556 ntBASIC6.19□□□□□ -1.42
USP11P51784 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.19□□□□□ -1.42
USP11P51784 AC013553.2-201ENST00000604244 589 ntBASIC6.19□□□□□ -1.42
USP11P51784 AL136363.1-201ENST00000605349 337 ntBASIC6.19□□□□□ -1.42
USP11P51784 AC091905.1-201ENST00000624400 311 ntBASIC6.19□□□□□ -1.42
USP11P51784 AC116563.2-201ENST00000624751 535 ntBASIC6.19□□□□□ -1.42
USP11P51784 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
USP11P51784 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
USP11P51784 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC6.19□□□□□ -1.42
USP11P51784 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.19□□□□□ -1.42
USP11P51784 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.19□□□□□ -1.42
USP11P51784 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.19□□□□□ -1.42
USP11P51784 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
USP11P51784 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.18□□□□□ -1.42
USP11P51784 PROS2P-201ENST00000474651 1951 ntBASIC6.18□□□□□ -1.42
USP11P51784 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USP11P51784 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
USP11P51784 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
USP11P51784 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USP11P51784 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC6.18□□□□□ -1.42
USP11P51784 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USP11P51784 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.18□□□□□ -1.42
USP11P51784 AC245100.2-201ENST00000454544 1679 ntBASIC6.18□□□□□ -1.42
USP11P51784 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USP11P51784 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USP11P51784 U8.3-201ENST00000363321 132 ntBASIC6.18□□□□□ -1.42
USP11P51784 RNA5SP335-201ENST00000363817 110 ntBASIC6.18□□□□□ -1.42
USP11P51784 SUGT1P1-201ENST00000379514 476 ntBASIC6.18□□□□□ -1.42
USP11P51784 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
USP11P51784 AC104297.1-201ENST00000393779 870 ntBASIC6.18□□□□□ -1.42
USP11P51784 AL391361.1-201ENST00000405580 489 ntBASIC6.18□□□□□ -1.42
USP11P51784 AC004690.1-201ENST00000418216 328 ntBASIC6.18□□□□□ -1.42
USP11P51784 AL953862.1-201ENST00000423016 168 ntBASIC6.18□□□□□ -1.42
USP11P51784 AL354766.1-201ENST00000423396 542 ntBASIC6.18□□□□□ -1.42
USP11P51784 FCF1P1-201ENST00000432690 571 ntBASIC6.18□□□□□ -1.42
USP11P51784 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC6.18□□□□□ -1.42
USP11P51784 HMGB3P9-201ENST00000441799 583 ntBASIC6.18□□□□□ -1.42
USP11P51784 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC6.18□□□□□ -1.42
USP11P51784 AL035090.1-201ENST00000454835 332 ntBASIC6.18□□□□□ -1.42
USP11P51784 RPS20P20-201ENST00000460498 340 ntBASIC6.18□□□□□ -1.42
USP11P51784 RN7SL197P-201ENST00000466981 299 ntBASIC6.18□□□□□ -1.42
USP11P51784 AL133445.1-201ENST00000467051 452 ntBASIC6.18□□□□□ -1.42
USP11P51784 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
USP11P51784 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
USP11P51784 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC6.18□□□□□ -1.42
USP11P51784 RNA5SP135-201ENST00000517019 125 ntBASIC6.18□□□□□ -1.42
USP11P51784 IGHV3-63-201ENST00000518422 341 ntBASIC6.18□□□□□ -1.42
USP11P51784 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC6.18□□□□□ -1.42
USP11P51784 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC6.18□□□□□ -1.42
USP11P51784 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC6.18□□□□□ -1.42
USP11P51784 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.18□□□□□ -1.42
USP11P51784 RPL21P5-201ENST00000554662 472 ntBASIC6.18□□□□□ -1.42
USP11P51784 AC007225.2-201ENST00000562529 256 ntBASIC6.18□□□□□ -1.42
USP11P51784 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USP11P51784 AC007151.1-201ENST00000572774 483 ntBASIC6.18□□□□□ -1.42
USP11P51784 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC6.18□□□□□ -1.42
USP11P51784 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC6.18□□□□□ -1.42
USP11P51784 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.18□□□□□ -1.42
USP11P51784 AC008121.3-201ENST00000618726 433 ntBASIC6.18□□□□□ -1.42
USP11P51784 AC079684.1-201ENST00000621405 437 ntBASIC6.18□□□□□ -1.42
USP11P51784 AL158801.5-201ENST00000623123 465 ntBASIC6.18□□□□□ -1.42
USP11P51784 AC139792.3-201ENST00000623525 224 ntBASIC6.18□□□□□ -1.42
USP11P51784 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.18□□□□□ -1.42
USP11P51784 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USP11P51784 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USP11P51784 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.18□□□□□ -1.42
USP11P51784 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.18□□□□□ -1.42
USP11P51784 AC007938.2-201ENST00000604666 2634 ntBASIC6.18□□□□□ -1.42
USP11P51784 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
USP11P51784 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
USP11P51784 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USP11P51784 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USP11P51784 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
USP11P51784 MAPK10-338ENST00000641647 3362 ntBASIC6.17□□□□□ -1.42
USP11P51784 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
USP11P51784 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USP11P51784 AP005432.1-201ENST00000580891 3485 ntBASIC6.17□□□□□ -1.42
USP11P51784 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
USP11P51784 AC021242.1-201ENST00000507315 2035 ntBASIC6.17□□□□□ -1.42
USP11P51784 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
USP11P51784 RNA5SP183-201ENST00000362452 119 ntBASIC6.17□□□□□ -1.42
USP11P51784 SNORA51.2-201ENST00000364595 132 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms