Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.37□□□□□ -1.71
GPC3P51654 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.37□□□□□ -1.71
GPC3P51654 NTAN1P1-201ENST00000603150 646 ntBASIC4.37□□□□□ -1.71
GPC3P51654 AC107308.1-201ENST00000615897 301 ntBASIC4.37□□□□□ -1.71
GPC3P51654 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
GPC3P51654 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.37□□□□□ -1.71
GPC3P51654 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.37□□□□□ -1.71
GPC3P51654 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
GPC3P51654 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
GPC3P51654 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
GPC3P51654 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
GPC3P51654 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.36□□□□□ -1.71
GPC3P51654 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
GPC3P51654 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
GPC3P51654 RNU1-85P-201ENST00000364127 164 ntBASIC4.36□□□□□ -1.71
GPC3P51654 MIR153-1-201ENST00000384914 90 ntBASIC4.36□□□□□ -1.71
GPC3P51654 RNU6ATAC-201ENST00000408749 126 ntBASIC4.36□□□□□ -1.71
GPC3P51654 RNA5SP306-201ENST00000411087 107 ntBASIC4.36□□□□□ -1.71
GPC3P51654 RNU2-6P-201ENST00000411404 190 ntBASIC4.36□□□□□ -1.71
GPC3P51654 AC092832.1-201ENST00000422934 400 ntBASIC4.36□□□□□ -1.71
GPC3P51654 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
GPC3P51654 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.36□□□□□ -1.71
GPC3P51654 RPS7P5-201ENST00000441482 581 ntBASIC4.36□□□□□ -1.71
GPC3P51654 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.36□□□□□ -1.71
GPC3P51654 AC069540.1-201ENST00000446320 988 ntBASIC4.36□□□□□ -1.71
GPC3P51654 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.36□□□□□ -1.71
GPC3P51654 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.36□□□□□ -1.71
GPC3P51654 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.36□□□□□ -1.71
GPC3P51654 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.36□□□□□ -1.71
GPC3P51654 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.36□□□□□ -1.71
GPC3P51654 RPS20P21-201ENST00000466859 343 ntBASIC4.36□□□□□ -1.71
GPC3P51654 AC007688.1-201ENST00000475592 759 ntBASIC4.36□□□□□ -1.71
GPC3P51654 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.36□□□□□ -1.71
GPC3P51654 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
GPC3P51654 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.36□□□□□ -1.71
GPC3P51654 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.36□□□□□ -1.71
GPC3P51654 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.36□□□□□ -1.71
GPC3P51654 AC007424.1-203ENST00000554613 687 ntBASIC4.36□□□□□ -1.71
GPC3P51654 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.36□□□□□ -1.71
GPC3P51654 AC233266.2-201ENST00000567067 528 ntBASIC4.36□□□□□ -1.71
GPC3P51654 MIR4429-201ENST00000580105 73 ntBASIC4.36□□□□□ -1.71
GPC3P51654 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.36□□□□□ -1.71
GPC3P51654 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.36□□□□□ -1.71
GPC3P51654 AC015726.1-201ENST00000602353 681 ntBASIC4.36□□□□□ -1.71
GPC3P51654 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.36□□□□□ -1.71
GPC3P51654 AL118556.2-201ENST00000614375 824 ntBASIC4.36□□□□□ -1.71
GPC3P51654 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.36□□□□□ -1.71
GPC3P51654 AC039056.2-201ENST00000622261 511 ntBASIC4.36□□□□□ -1.71
GPC3P51654 AC004943.3-201ENST00000624116 600 ntBASIC4.36□□□□□ -1.71
GPC3P51654 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.36□□□□□ -1.71
GPC3P51654 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
GPC3P51654 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
GPC3P51654 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
GPC3P51654 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
GPC3P51654 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.35□□□□□ -1.71
GPC3P51654 MAPK10-253ENST00000641010 4072 ntBASIC4.35□□□□□ -1.71
GPC3P51654 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
GPC3P51654 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
GPC3P51654 MIR23B-201ENST00000384832 97 ntBASIC4.35□□□□□ -1.71
GPC3P51654 ATP5F1P3-201ENST00000397213 657 ntBASIC4.35□□□□□ -1.71
GPC3P51654 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.35□□□□□ -1.71
GPC3P51654 Z97055.1-201ENST00000419730 712 ntBASIC4.35□□□□□ -1.71
GPC3P51654 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.35□□□□□ -1.71
GPC3P51654 AC093698.1-201ENST00000423843 571 ntBASIC4.35□□□□□ -1.71
GPC3P51654 RPL7P28-201ENST00000437739 740 ntBASIC4.35□□□□□ -1.71
GPC3P51654 AL513321.1-201ENST00000441175 761 ntBASIC4.35□□□□□ -1.71
GPC3P51654 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.35□□□□□ -1.71
GPC3P51654 RPL21P71-201ENST00000465598 459 ntBASIC4.35□□□□□ -1.71
GPC3P51654 RPS3AP6-201ENST00000484430 795 ntBASIC4.35□□□□□ -1.71
GPC3P51654 RN7SL323P-201ENST00000494712 295 ntBASIC4.35□□□□□ -1.71
GPC3P51654 AP002812.1-201ENST00000495378 474 ntBASIC4.35□□□□□ -1.71
GPC3P51654 RPL31P61-201ENST00000496160 376 ntBASIC4.35□□□□□ -1.71
GPC3P51654 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.35□□□□□ -1.71
GPC3P51654 AC090071.1-201ENST00000507713 644 ntBASIC4.35□□□□□ -1.71
GPC3P51654 SLC25A15P5-201ENST00000508033 253 ntBASIC4.35□□□□□ -1.71
GPC3P51654 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.35□□□□□ -1.71
GPC3P51654 RPL7L1P13-201ENST00000511702 739 ntBASIC4.35□□□□□ -1.71
GPC3P51654 CIR1P1-201ENST00000524055 1133 ntBASIC4.35□□□□□ -1.71
GPC3P51654 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC4.35□□□□□ -1.71
GPC3P51654 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC4.35□□□□□ -1.71
GPC3P51654 RFPL1S-203ENST00000539579 330 ntBASIC4.35□□□□□ -1.71
GPC3P51654 CENPUP2-201ENST00000555897 1186 ntBASIC4.35□□□□□ -1.71
GPC3P51654 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.35□□□□□ -1.71
GPC3P51654 AC090312.2-201ENST00000582687 378 ntBASIC4.35□□□□□ -1.71
GPC3P51654 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.35□□□□□ -1.71
GPC3P51654 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.35□□□□□ -1.71
GPC3P51654 AL356490.1-201ENST00000623079 479 ntBASIC4.35□□□□□ -1.71
GPC3P51654 AL118508.4-201ENST00000624142 1176 ntBASIC4.35□□□□□ -1.71
GPC3P51654 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.35□□□□□ -1.71
GPC3P51654 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
GPC3P51654 ZNF962P-201ENST00000443465 3140 ntBASIC4.35□□□□□ -1.71
GPC3P51654 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.35□□□□□ -1.71
GPC3P51654 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.35□□□□□ -1.71
GPC3P51654 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.35□□□□□ -1.71
GPC3P51654 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
GPC3P51654 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
GPC3P51654 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.34□□□□□ -1.71
GPC3P51654 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.34□□□□□ -1.71
GPC3P51654 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
GPC3P51654 SNORA62.3-201ENST00000365110 153 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms