Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RNF144AP50876 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RNF144AP50876 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RNF144AP50876 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RNF144AP50876 AC091812.1-201ENST00000432235 1948 ntBASIC6.19□□□□□ -1.42
RNF144AP50876 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RNF144AP50876 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.19□□□□□ -1.42
RNF144AP50876 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
RNF144AP50876 RPL24P4-201ENST00000326586 421 ntBASIC6.19□□□□□ -1.42
RNF144AP50876 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
RNF144AP50876 RNU6-97P-201ENST00000363387 104 ntBASIC6.19□□□□□ -1.42
RNF144AP50876 RNA5SP514-201ENST00000363717 111 ntBASIC6.19□□□□□ -1.42
RNF144AP50876 RNU5A-8P-201ENST00000364102 114 ntBASIC6.19□□□□□ -1.42
RNF144AP50876 RN7SKP257-201ENST00000364525 309 ntBASIC6.19□□□□□ -1.42
RNF144AP50876 RNA5SP152-201ENST00000365184 110 ntBASIC6.19□□□□□ -1.42
RNF144AP50876 Y_RNA.350-201ENST00000365409 98 ntBASIC6.19□□□□□ -1.42
RNF144AP50876 RNU1-55P-201ENST00000365510 158 ntBASIC6.19□□□□□ -1.42
RNF144AP50876 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.19□□□□□ -1.42
RNF144AP50876 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
RNF144AP50876 Y_RNA.515-201ENST00000384535 112 ntBASIC6.19□□□□□ -1.42
RNF144AP50876 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
RNF144AP50876 AC079807.1-201ENST00000429993 481 ntBASIC6.19□□□□□ -1.42
RNF144AP50876 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RNF144AP50876 UBE2V1P13-201ENST00000436983 439 ntBASIC6.19□□□□□ -1.42
RNF144AP50876 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC6.19□□□□□ -1.42
RNF144AP50876 AC108734.1-201ENST00000439549 399 ntBASIC6.19□□□□□ -1.42
RNF144AP50876 DYNLT3P2-201ENST00000442517 295 ntBASIC6.19□□□□□ -1.42
RNF144AP50876 AL356133.1-201ENST00000444762 372 ntBASIC6.19□□□□□ -1.42
RNF144AP50876 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.19□□□□□ -1.42
RNF144AP50876 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC6.19□□□□□ -1.42
RNF144AP50876 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RNF144AP50876 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC6.19□□□□□ -1.42
RNF144AP50876 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
RNF144AP50876 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC6.19□□□□□ -1.42
RNF144AP50876 SLC25A15P5-201ENST00000508033 253 ntBASIC6.19□□□□□ -1.42
RNF144AP50876 FTH1P21-201ENST00000512179 511 ntBASIC6.19□□□□□ -1.42
RNF144AP50876 RNU7-51P-201ENST00000516560 62 ntBASIC6.19□□□□□ -1.42
RNF144AP50876 SCARNA11.1-201ENST00000516918 132 ntBASIC6.19□□□□□ -1.42
RNF144AP50876 RNA5SP278-201ENST00000517055 102 ntBASIC6.19□□□□□ -1.42
RNF144AP50876 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC6.19□□□□□ -1.42
RNF144AP50876 AC087752.2-201ENST00000521219 281 ntBASIC6.19□□□□□ -1.42
RNF144AP50876 AC078899.1-201ENST00000521432 1185 ntBASIC6.19□□□□□ -1.42
RNF144AP50876 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.19□□□□□ -1.42
RNF144AP50876 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC6.19□□□□□ -1.42
RNF144AP50876 SNRPCP6-201ENST00000528310 210 ntBASIC6.19□□□□□ -1.42
RNF144AP50876 OR4P1P-201ENST00000530808 1136 ntBASIC6.19□□□□□ -1.42
RNF144AP50876 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
RNF144AP50876 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
RNF144AP50876 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC6.19□□□□□ -1.42
RNF144AP50876 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.19□□□□□ -1.42
RNF144AP50876 NQO1-205ENST00000561500 891 ntTSL 3 BASIC6.19□□□□□ -1.42
RNF144AP50876 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC6.19□□□□□ -1.42
RNF144AP50876 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.19□□□□□ -1.42
RNF144AP50876 AL355297.3-201ENST00000604082 446 ntBASIC6.19□□□□□ -1.42
RNF144AP50876 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.19□□□□□ -1.42
RNF144AP50876 AC098479.1-201ENST00000609225 154 ntBASIC6.19□□□□□ -1.42
RNF144AP50876 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC6.19□□□□□ -1.42
RNF144AP50876 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC6.19□□□□□ -1.42
RNF144AP50876 AL096712.1-201ENST00000614561 159 ntBASIC6.19□□□□□ -1.42
RNF144AP50876 AL138726.1-201ENST00000614873 333 ntBASIC6.19□□□□□ -1.42
RNF144AP50876 AC015967.1-201ENST00000619893 476 ntBASIC6.19□□□□□ -1.42
RNF144AP50876 U1.31-201ENST00000620022 160 ntBASIC6.19□□□□□ -1.42
RNF144AP50876 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RNF144AP50876 AC011155.2-201ENST00000623202 216 ntBASIC6.19□□□□□ -1.42
RNF144AP50876 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
RNF144AP50876 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
RNF144AP50876 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RNF144AP50876 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RNF144AP50876 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.19□□□□□ -1.42
RNF144AP50876 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
RNF144AP50876 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RNF144AP50876 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
RNF144AP50876 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.18□□□□□ -1.42
RNF144AP50876 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
RNF144AP50876 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RNF144AP50876 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RNF144AP50876 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
RNF144AP50876 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.18□□□□□ -1.42
RNF144AP50876 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RNF144AP50876 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
RNF144AP50876 RNU1-115P-201ENST00000365329 160 ntBASIC6.18□□□□□ -1.42
RNF144AP50876 RNU4-2-201ENST00000365668 141 ntBASIC6.18□□□□□ -1.42
RNF144AP50876 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RNF144AP50876 PPIAP26-201ENST00000377951 522 ntBASIC6.18□□□□□ -1.42
RNF144AP50876 Y_RNA.404-201ENST00000383978 102 ntBASIC6.18□□□□□ -1.42
RNF144AP50876 RNU6-713P-201ENST00000384761 107 ntBASIC6.18□□□□□ -1.42
RNF144AP50876 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
RNF144AP50876 RNU6-823P-201ENST00000391042 103 ntBASIC6.18□□□□□ -1.42
RNF144AP50876 PRRC2CP1-201ENST00000404428 159 ntBASIC6.18□□□□□ -1.42
RNF144AP50876 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RNF144AP50876 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.18□□□□□ -1.42
RNF144AP50876 RNU2-36P-201ENST00000410361 191 ntBASIC6.18□□□□□ -1.42
RNF144AP50876 RPSAP35-201ENST00000413753 818 ntBASIC6.18□□□□□ -1.42
RNF144AP50876 RPL31P45-201ENST00000419532 356 ntBASIC6.18□□□□□ -1.42
RNF144AP50876 AC083862.1-201ENST00000427378 1242 ntBASIC6.18□□□□□ -1.42
RNF144AP50876 OR2AS1P-201ENST00000427827 319 ntBASIC6.18□□□□□ -1.42
RNF144AP50876 AC022022.1-201ENST00000430304 178 ntBASIC6.18□□□□□ -1.42
RNF144AP50876 PUDPP2-201ENST00000431423 643 ntBASIC6.18□□□□□ -1.42
RNF144AP50876 RPL37P1-201ENST00000432310 284 ntBASIC6.18□□□□□ -1.42
RNF144AP50876 YWHAZP8-201ENST00000436935 731 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms