Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 SNORD39.2-201ENST00000579995 76 ntBASIC3.61□□□□□ -1.83
CXCL12P48061 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.61□□□□□ -1.83
CXCL12P48061 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.61□□□□□ -1.83
CXCL12P48061 AL390816.3-201ENST00000604527 1066 ntBASIC3.61□□□□□ -1.83
CXCL12P48061 AC128687.2-201ENST00000609657 566 ntBASIC3.61□□□□□ -1.83
CXCL12P48061 AC004241.3-201ENST00000611728 517 ntBASIC3.61□□□□□ -1.83
CXCL12P48061 MIR7112-201ENST00000616126 65 ntBASIC3.61□□□□□ -1.83
CXCL12P48061 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.61□□□□□ -1.83
CXCL12P48061 MIR6715B-201ENST00000637172 77 ntBASIC3.61□□□□□ -1.83
CXCL12P48061 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CXCL12P48061 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.61□□□□□ -1.83
CXCL12P48061 AL365361.1-201ENST00000566942 3481 ntBASIC3.61□□□□□ -1.83
CXCL12P48061 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CXCL12P48061 CEP170P1-201ENST00000502249 4587 ntBASIC3.6□□□□□ -1.83
CXCL12P48061 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CXCL12P48061 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CXCL12P48061 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CXCL12P48061 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CXCL12P48061 RNU6-618P-201ENST00000363518 112 ntBASIC3.6□□□□□ -1.83
CXCL12P48061 GCNT6-201ENST00000379591 934 ntBASIC3.6□□□□□ -1.83
CXCL12P48061 SNORD17-201ENST00000390930 237 ntBASIC3.6□□□□□ -1.83
CXCL12P48061 AL603766.1-201ENST00000407763 664 ntBASIC3.6□□□□□ -1.83
CXCL12P48061 RNA5SP146-201ENST00000410743 123 ntBASIC3.6□□□□□ -1.83
CXCL12P48061 AC244453.4-201ENST00000419150 388 ntBASIC3.6□□□□□ -1.83
CXCL12P48061 RPL21P110-201ENST00000433345 446 ntBASIC3.6□□□□□ -1.83
CXCL12P48061 RPS20P1-201ENST00000434853 354 ntBASIC3.6□□□□□ -1.83
CXCL12P48061 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.6□□□□□ -1.83
CXCL12P48061 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.6□□□□□ -1.83
CXCL12P48061 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.6□□□□□ -1.83
CXCL12P48061 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.6□□□□□ -1.83
CXCL12P48061 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.6□□□□□ -1.83
CXCL12P48061 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC3.6□□□□□ -1.83
CXCL12P48061 PRELID3BP7-201ENST00000503606 469 ntBASIC3.6□□□□□ -1.83
CXCL12P48061 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.6□□□□□ -1.83
CXCL12P48061 AC025554.1-201ENST00000505641 188 ntBASIC3.6□□□□□ -1.83
CXCL12P48061 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.6□□□□□ -1.83
CXCL12P48061 RPL23AP94-201ENST00000512518 302 ntBASIC3.6□□□□□ -1.83
CXCL12P48061 AC010342.1-201ENST00000514047 877 ntBASIC3.6□□□□□ -1.83
CXCL12P48061 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.6□□□□□ -1.83
CXCL12P48061 SUMO2P20-201ENST00000520803 283 ntBASIC3.6□□□□□ -1.83
CXCL12P48061 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.6□□□□□ -1.83
CXCL12P48061 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.6□□□□□ -1.83
CXCL12P48061 AC124068.1-201ENST00000563131 678 ntBASIC3.6□□□□□ -1.83
CXCL12P48061 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.6□□□□□ -1.83
CXCL12P48061 MTND2P13-201ENST00000577438 1039 ntBASIC3.6□□□□□ -1.83
CXCL12P48061 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.6□□□□□ -1.83
CXCL12P48061 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.6□□□□□ -1.83
CXCL12P48061 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.6□□□□□ -1.83
CXCL12P48061 IPO8P1-201ENST00000455509 3109 ntBASIC3.6□□□□□ -1.83
CXCL12P48061 UBE3AP2-201ENST00000429033 2259 ntBASIC3.6□□□□□ -1.83
CXCL12P48061 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CXCL12P48061 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CXCL12P48061 AC087565.3-202ENST00000642085 1603 ntBASIC3.59□□□□□ -1.83
CXCL12P48061 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.59□□□□□ -1.83
CXCL12P48061 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.59□□□□□ -1.83
CXCL12P48061 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.59□□□□□ -1.83
CXCL12P48061 AC011266.1-201ENST00000624119 3569 ntBASIC3.59□□□□□ -1.83
CXCL12P48061 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CXCL12P48061 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CXCL12P48061 RNA5SP105-201ENST00000391123 113 ntBASIC3.59□□□□□ -1.83
CXCL12P48061 UBA52P6-201ENST00000399822 382 ntBASIC3.59□□□□□ -1.83
CXCL12P48061 RNU6-564P-201ENST00000410983 104 ntBASIC3.59□□□□□ -1.83
CXCL12P48061 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.59□□□□□ -1.83
CXCL12P48061 DBIP2-201ENST00000419076 262 ntBASIC3.59□□□□□ -1.83
CXCL12P48061 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.59□□□□□ -1.83
CXCL12P48061 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.59□□□□□ -1.83
CXCL12P48061 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.59□□□□□ -1.83
CXCL12P48061 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.59□□□□□ -1.83
CXCL12P48061 AL353597.2-202ENST00000434901 373 ntBASIC3.59□□□□□ -1.83
CXCL12P48061 AL831737.1-201ENST00000441288 271 ntBASIC3.59□□□□□ -1.83
CXCL12P48061 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.59□□□□□ -1.83
CXCL12P48061 RPL31P20-201ENST00000449593 360 ntBASIC3.59□□□□□ -1.83
CXCL12P48061 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC3.59□□□□□ -1.83
CXCL12P48061 AC098824.1-201ENST00000453565 980 ntBASIC3.59□□□□□ -1.83
CXCL12P48061 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.59□□□□□ -1.83
CXCL12P48061 U3.44-201ENST00000458938 192 ntBASIC3.59□□□□□ -1.83
CXCL12P48061 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.59□□□□□ -1.83
CXCL12P48061 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.59□□□□□ -1.83
CXCL12P48061 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.59□□□□□ -1.83
CXCL12P48061 STMN1P2-201ENST00000508435 439 ntBASIC3.59□□□□□ -1.83
CXCL12P48061 AC010285.3-201ENST00000511668 676 ntBASIC3.59□□□□□ -1.83
CXCL12P48061 snoU109.6-201ENST00000516831 118 ntBASIC3.59□□□□□ -1.83
CXCL12P48061 IGHV3-32-201ENST00000519182 355 ntBASIC3.59□□□□□ -1.83
CXCL12P48061 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.59□□□□□ -1.83
CXCL12P48061 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.59□□□□□ -1.83
CXCL12P48061 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.59□□□□□ -1.83
CXCL12P48061 AC027807.1-201ENST00000559921 996 ntBASIC3.59□□□□□ -1.83
CXCL12P48061 AC009268.1-201ENST00000561352 1203 ntBASIC3.59□□□□□ -1.83
CXCL12P48061 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC3.59□□□□□ -1.83
CXCL12P48061 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.59□□□□□ -1.83
CXCL12P48061 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC3.59□□□□□ -1.83
CXCL12P48061 AL135786.2-201ENST00000608422 615 ntBASIC3.59□□□□□ -1.83
CXCL12P48061 U4.6-201ENST00000621618 127 ntBASIC3.59□□□□□ -1.83
CXCL12P48061 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.59□□□□□ -1.83
CXCL12P48061 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CXCL12P48061 BDP1P-201ENST00000582658 1990 ntBASIC3.59□□□□□ -1.83
CXCL12P48061 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.59□□□□□ -1.83
CXCL12P48061 PNPT1P2-201ENST00000456768 2050 ntBASIC3.59□□□□□ -1.83
CXCL12P48061 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CXCL12P48061 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.59□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms