Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC090281.1-201ENST00000523019 276 ntBASIC4.1□□□□□ -1.75
BRCC3P46736 OR5M7P-201ENST00000526140 972 ntBASIC4.1□□□□□ -1.75
BRCC3P46736 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.1□□□□□ -1.75
BRCC3P46736 AC135001.1-201ENST00000544546 283 ntBASIC4.1□□□□□ -1.75
BRCC3P46736 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.1□□□□□ -1.75
BRCC3P46736 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.1□□□□□ -1.75
BRCC3P46736 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.1□□□□□ -1.75
BRCC3P46736 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.1□□□□□ -1.75
BRCC3P46736 AC015911.5-201ENST00000587076 451 ntBASIC4.1□□□□□ -1.75
BRCC3P46736 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.1□□□□□ -1.75
BRCC3P46736 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.1□□□□□ -1.75
BRCC3P46736 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.1□□□□□ -1.75
BRCC3P46736 AC068790.5-201ENST00000602741 355 ntBASIC4.1□□□□□ -1.75
BRCC3P46736 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.1□□□□□ -1.75
BRCC3P46736 AL391497.1-201ENST00000608671 547 ntBASIC4.1□□□□□ -1.75
BRCC3P46736 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.1□□□□□ -1.75
BRCC3P46736 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.1□□□□□ -1.75
BRCC3P46736 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
BRCC3P46736 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
BRCC3P46736 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
BRCC3P46736 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.1□□□□□ -1.75
BRCC3P46736 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
BRCC3P46736 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
BRCC3P46736 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.09□□□□□ -1.75
BRCC3P46736 SNORA5A-201ENST00000384111 134 ntBASIC4.09□□□□□ -1.75
BRCC3P46736 RNU6-452P-201ENST00000384406 107 ntBASIC4.09□□□□□ -1.75
BRCC3P46736 HMGB1P10-201ENST00000395823 563 ntBASIC4.09□□□□□ -1.75
BRCC3P46736 RPL21P17-201ENST00000397467 475 ntBASIC4.09□□□□□ -1.75
BRCC3P46736 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.09□□□□□ -1.75
BRCC3P46736 AC091286.1-201ENST00000431233 461 ntBASIC4.09□□□□□ -1.75
BRCC3P46736 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.09□□□□□ -1.75
BRCC3P46736 RNFT1P2-201ENST00000443064 757 ntBASIC4.09□□□□□ -1.75
BRCC3P46736 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.09□□□□□ -1.75
BRCC3P46736 UBDP1-202ENST00000457888 382 ntBASIC4.09□□□□□ -1.75
BRCC3P46736 AC078857.1-201ENST00000469870 667 ntBASIC4.09□□□□□ -1.75
BRCC3P46736 NPM1P17-201ENST00000479221 602 ntBASIC4.09□□□□□ -1.75
BRCC3P46736 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.09□□□□□ -1.75
BRCC3P46736 UBE2CP3-201ENST00000502715 450 ntBASIC4.09□□□□□ -1.75
BRCC3P46736 PAICSP4-201ENST00000517543 1253 ntBASIC4.09□□□□□ -1.75
BRCC3P46736 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.09□□□□□ -1.75
BRCC3P46736 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.09□□□□□ -1.75
BRCC3P46736 AP001033.2-201ENST00000609701 1003 ntBASIC4.09□□□□□ -1.75
BRCC3P46736 AC243654.2-201ENST00000612843 443 ntBASIC4.09□□□□□ -1.75
BRCC3P46736 MIR6075-201ENST00000620782 95 ntBASIC4.09□□□□□ -1.75
BRCC3P46736 FRG1DP-201ENST00000635586 771 ntBASIC4.09□□□□□ -1.75
BRCC3P46736 AL034408.1-202ENST00000636088 415 ntBASIC4.09□□□□□ -1.75
BRCC3P46736 AC106858.1-201ENST00000637497 429 ntBASIC4.09□□□□□ -1.75
BRCC3P46736 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.09□□□□□ -1.75
BRCC3P46736 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
BRCC3P46736 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.09□□□□□ -1.76
BRCC3P46736 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
BRCC3P46736 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
BRCC3P46736 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.09□□□□□ -1.76
BRCC3P46736 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
BRCC3P46736 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
BRCC3P46736 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
BRCC3P46736 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
BRCC3P46736 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
BRCC3P46736 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.08□□□□□ -1.76
BRCC3P46736 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
BRCC3P46736 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
BRCC3P46736 AC007066.1-201ENST00000392902 381 ntBASIC4.08□□□□□ -1.76
BRCC3P46736 RPL7P60-201ENST00000397636 735 ntBASIC4.08□□□□□ -1.76
BRCC3P46736 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.08□□□□□ -1.76
BRCC3P46736 RNU2-17P-201ENST00000410290 190 ntBASIC4.08□□□□□ -1.76
BRCC3P46736 AL121882.1-201ENST00000422893 417 ntBASIC4.08□□□□□ -1.76
BRCC3P46736 UBE2D3P3-201ENST00000426992 425 ntBASIC4.08□□□□□ -1.76
BRCC3P46736 AL035458.1-201ENST00000433096 585 ntBASIC4.08□□□□□ -1.76
BRCC3P46736 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.08□□□□□ -1.76
BRCC3P46736 RPS20P1-201ENST00000434853 354 ntBASIC4.08□□□□□ -1.76
BRCC3P46736 MED6P1-201ENST00000439659 713 ntBASIC4.08□□□□□ -1.76
BRCC3P46736 EIF4A1P11-201ENST00000451239 222 ntBASIC4.08□□□□□ -1.76
BRCC3P46736 RPL23AP23-201ENST00000452590 471 ntBASIC4.08□□□□□ -1.76
BRCC3P46736 AC092902.1-201ENST00000486999 259 ntBASIC4.08□□□□□ -1.76
BRCC3P46736 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
BRCC3P46736 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
BRCC3P46736 AC024560.2-201ENST00000507981 1497 ntBASIC4.08□□□□□ -1.76
BRCC3P46736 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.08□□□□□ -1.76
BRCC3P46736 AC068446.3-201ENST00000555285 382 ntBASIC4.08□□□□□ -1.76
BRCC3P46736 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.08□□□□□ -1.76
BRCC3P46736 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.08□□□□□ -1.76
BRCC3P46736 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.08□□□□□ -1.76
BRCC3P46736 AL049634.3-201ENST00000604968 457 ntBASIC4.08□□□□□ -1.76
BRCC3P46736 SNORA51-201ENST00000606420 132 ntBASIC4.08□□□□□ -1.76
BRCC3P46736 AC011374.2-201ENST00000607135 526 ntBASIC4.08□□□□□ -1.76
BRCC3P46736 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
BRCC3P46736 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
BRCC3P46736 AC123768.4-201ENST00000616244 701 ntBASIC4.08□□□□□ -1.76
BRCC3P46736 AC079684.1-201ENST00000621405 437 ntBASIC4.08□□□□□ -1.76
BRCC3P46736 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.08□□□□□ -1.76
BRCC3P46736 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.08□□□□□ -1.76
BRCC3P46736 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.08□□□□□ -1.76
BRCC3P46736 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.08□□□□□ -1.76
BRCC3P46736 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
BRCC3P46736 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.07□□□□□ -1.76
BRCC3P46736 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
BRCC3P46736 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
BRCC3P46736 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
BRCC3P46736 METTL21EP-201ENST00000298105 713 ntBASIC4.07□□□□□ -1.76
BRCC3P46736 RNU6-252P-201ENST00000363232 107 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms