Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 SNORA3.3-201ENST00000408712 125 ntBASIC3.84□□□□□ -1.79
FDFT1P37268 RPS20P25-201ENST00000412447 352 ntBASIC3.84□□□□□ -1.79
FDFT1P37268 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.84□□□□□ -1.79
FDFT1P37268 OR8F1P-201ENST00000425243 930 ntBASIC3.84□□□□□ -1.79
FDFT1P37268 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.84□□□□□ -1.79
FDFT1P37268 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.84□□□□□ -1.79
FDFT1P37268 AC006326.1-201ENST00000445465 787 ntBASIC3.84□□□□□ -1.79
FDFT1P37268 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.84□□□□□ -1.79
FDFT1P37268 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.84□□□□□ -1.79
FDFT1P37268 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.84□□□□□ -1.79
FDFT1P37268 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.84□□□□□ -1.79
FDFT1P37268 AC096992.1-201ENST00000459808 709 ntBASIC3.84□□□□□ -1.79
FDFT1P37268 TPT1P3-201ENST00000492841 512 ntBASIC3.84□□□□□ -1.79
FDFT1P37268 SNX5P1-201ENST00000505757 1041 ntBASIC3.84□□□□□ -1.79
FDFT1P37268 Vault.1-201ENST00000516474 102 ntBASIC3.84□□□□□ -1.79
FDFT1P37268 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.84□□□□□ -1.79
FDFT1P37268 AC022695.1-201ENST00000522089 237 ntBASIC3.84□□□□□ -1.79
FDFT1P37268 NOP56P3-201ENST00000549457 385 ntBASIC3.84□□□□□ -1.79
FDFT1P37268 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
FDFT1P37268 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.84□□□□□ -1.79
FDFT1P37268 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.84□□□□□ -1.79
FDFT1P37268 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.84□□□□□ -1.79
FDFT1P37268 AL606490.9-201ENST00000603331 271 ntBASIC3.84□□□□□ -1.79
FDFT1P37268 LLPHP1-201ENST00000603571 367 ntBASIC3.84□□□□□ -1.79
FDFT1P37268 AL163642.2-201ENST00000604722 1019 ntBASIC3.84□□□□□ -1.79
FDFT1P37268 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.84□□□□□ -1.79
FDFT1P37268 MIR6758-201ENST00000620653 63 ntBASIC3.84□□□□□ -1.79
FDFT1P37268 AC079684.1-201ENST00000621405 437 ntBASIC3.84□□□□□ -1.79
FDFT1P37268 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
FDFT1P37268 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
FDFT1P37268 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
FDFT1P37268 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.84□□□□□ -1.79
FDFT1P37268 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
FDFT1P37268 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.83□□□□□ -1.8
FDFT1P37268 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.83□□□□□ -1.8
FDFT1P37268 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
FDFT1P37268 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
FDFT1P37268 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
FDFT1P37268 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
FDFT1P37268 SPRR2C-201ENST00000290702 219 ntBASIC3.83□□□□□ -1.8
FDFT1P37268 RPL32P3-201ENST00000359025 275 ntBASIC3.83□□□□□ -1.8
FDFT1P37268 RNA5SP424-201ENST00000390988 115 ntBASIC3.83□□□□□ -1.8
FDFT1P37268 AC010385.1-201ENST00000412374 256 ntBASIC3.83□□□□□ -1.8
FDFT1P37268 AC127526.1-201ENST00000417526 366 ntBASIC3.83□□□□□ -1.8
FDFT1P37268 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.83□□□□□ -1.8
FDFT1P37268 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.83□□□□□ -1.8
FDFT1P37268 AC008065.1-201ENST00000428525 348 ntBASIC3.83□□□□□ -1.8
FDFT1P37268 AL117339.2-201ENST00000430475 180 ntBASIC3.83□□□□□ -1.8
FDFT1P37268 BMS1P19-201ENST00000433925 393 ntBASIC3.83□□□□□ -1.8
FDFT1P37268 SETD6P1-201ENST00000444575 317 ntBASIC3.83□□□□□ -1.8
FDFT1P37268 HSFY6P-201ENST00000445573 403 ntBASIC3.83□□□□□ -1.8
FDFT1P37268 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.83□□□□□ -1.8
FDFT1P37268 SNRPGP5-201ENST00000456003 220 ntBASIC3.83□□□□□ -1.8
FDFT1P37268 OR9M1P-201ENST00000459641 921 ntBASIC3.83□□□□□ -1.8
FDFT1P37268 OR9N1P-202ENST00000494289 481 ntBASIC3.83□□□□□ -1.8
FDFT1P37268 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.83□□□□□ -1.8
FDFT1P37268 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.83□□□□□ -1.8
FDFT1P37268 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.83□□□□□ -1.8
FDFT1P37268 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.83□□□□□ -1.8
FDFT1P37268 AC108064.1-201ENST00000513791 460 ntBASIC3.83□□□□□ -1.8
FDFT1P37268 RNU6-1231P-201ENST00000517185 103 ntBASIC3.83□□□□□ -1.8
FDFT1P37268 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.83□□□□□ -1.8
FDFT1P37268 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.83□□□□□ -1.8
FDFT1P37268 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.83□□□□□ -1.8
FDFT1P37268 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.83□□□□□ -1.8
FDFT1P37268 RNA5SP108-201ENST00000605921 117 ntBASIC3.83□□□□□ -1.8
FDFT1P37268 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.83□□□□□ -1.8
FDFT1P37268 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
FDFT1P37268 AL162233.1-201ENST00000620014 944 ntBASIC3.83□□□□□ -1.8
FDFT1P37268 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.83□□□□□ -1.8
FDFT1P37268 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.83□□□□□ -1.8
FDFT1P37268 AC009501.3-201ENST00000605001 1352 ntBASIC3.83□□□□□ -1.8
FDFT1P37268 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
FDFT1P37268 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
FDFT1P37268 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
FDFT1P37268 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
FDFT1P37268 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
FDFT1P37268 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
FDFT1P37268 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
FDFT1P37268 DCAF13P1-201ENST00000495256 1330 ntBASIC3.82□□□□□ -1.8
FDFT1P37268 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
FDFT1P37268 METTL21EP-201ENST00000298105 713 ntBASIC3.82□□□□□ -1.8
FDFT1P37268 OR5T3-201ENST00000303059 1023 ntBASIC3.82□□□□□ -1.8
FDFT1P37268 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.82□□□□□ -1.8
FDFT1P37268 AL049693.1-201ENST00000402760 611 ntBASIC3.82□□□□□ -1.8
FDFT1P37268 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.82□□□□□ -1.8
FDFT1P37268 TCEA1P2-201ENST00000420496 906 ntBASIC3.82□□□□□ -1.8
FDFT1P37268 AC092832.1-201ENST00000422934 400 ntBASIC3.82□□□□□ -1.8
FDFT1P37268 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.82□□□□□ -1.8
FDFT1P37268 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
FDFT1P37268 TPTE2P6-202ENST00000445572 1007 ntBASIC3.82□□□□□ -1.8
FDFT1P37268 PPIAP3-201ENST00000450588 505 ntBASIC3.82□□□□□ -1.8
FDFT1P37268 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.82□□□□□ -1.8
FDFT1P37268 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.82□□□□□ -1.8
FDFT1P37268 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.82□□□□□ -1.8
FDFT1P37268 AC099563.1-201ENST00000456086 418 ntBASIC3.82□□□□□ -1.8
FDFT1P37268 RPL21P71-201ENST00000465598 459 ntBASIC3.82□□□□□ -1.8
FDFT1P37268 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.82□□□□□ -1.8
FDFT1P37268 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.82□□□□□ -1.8
FDFT1P37268 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms