Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC046144.1-201ENST00000478559 1853 ntBASIC3.92□□□□□ -1.78
PTPN6P29350 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.92□□□□□ -1.78
PTPN6P29350 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PTPN6P29350 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.91□□□□□ -1.78
PTPN6P29350 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.91□□□□□ -1.78
PTPN6P29350 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.91□□□□□ -1.78
PTPN6P29350 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PTPN6P29350 RNA5SP513-201ENST00000364648 118 ntBASIC3.91□□□□□ -1.78
PTPN6P29350 SNORA51.12-201ENST00000384448 134 ntBASIC3.91□□□□□ -1.78
PTPN6P29350 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
PTPN6P29350 PGBD4P8-201ENST00000412993 562 ntBASIC3.91□□□□□ -1.78
PTPN6P29350 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.91□□□□□ -1.78
PTPN6P29350 RPL7P53-201ENST00000421245 739 ntBASIC3.91□□□□□ -1.78
PTPN6P29350 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.91□□□□□ -1.78
PTPN6P29350 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.91□□□□□ -1.78
PTPN6P29350 AC092170.1-201ENST00000440211 356 ntBASIC3.91□□□□□ -1.78
PTPN6P29350 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
PTPN6P29350 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.91□□□□□ -1.78
PTPN6P29350 NUTF2P3-201ENST00000448540 384 ntBASIC3.91□□□□□ -1.78
PTPN6P29350 DNAJC19P8-201ENST00000452887 259 ntBASIC3.91□□□□□ -1.78
PTPN6P29350 TVP23BP2-201ENST00000455082 615 ntBASIC3.91□□□□□ -1.78
PTPN6P29350 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.91□□□□□ -1.78
PTPN6P29350 AC073522.1-201ENST00000483312 377 ntBASIC3.91□□□□□ -1.78
PTPN6P29350 AC105137.1-201ENST00000484355 562 ntBASIC3.91□□□□□ -1.78
PTPN6P29350 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PTPN6P29350 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.91□□□□□ -1.78
PTPN6P29350 AC108475.1-201ENST00000507880 950 ntBASIC3.91□□□□□ -1.78
PTPN6P29350 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.91□□□□□ -1.78
PTPN6P29350 RNU4-60P-201ENST00000517239 135 ntBASIC3.91□□□□□ -1.78
PTPN6P29350 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.91□□□□□ -1.78
PTPN6P29350 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PTPN6P29350 AC113192.3-201ENST00000529152 742 ntBASIC3.91□□□□□ -1.78
PTPN6P29350 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.91□□□□□ -1.78
PTPN6P29350 CYCSP29-201ENST00000533731 318 ntBASIC3.91□□□□□ -1.78
PTPN6P29350 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PTPN6P29350 RFPL1S-203ENST00000539579 330 ntBASIC3.91□□□□□ -1.78
PTPN6P29350 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.91□□□□□ -1.78
PTPN6P29350 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.91□□□□□ -1.78
PTPN6P29350 CBX3P5-201ENST00000552017 521 ntBASIC3.91□□□□□ -1.78
PTPN6P29350 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.91□□□□□ -1.78
PTPN6P29350 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PTPN6P29350 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.91□□□□□ -1.78
PTPN6P29350 AC026741.1-201ENST00000605892 482 ntBASIC3.91□□□□□ -1.78
PTPN6P29350 AC005972.3-201ENST00000606304 481 ntBASIC3.91□□□□□ -1.78
PTPN6P29350 AL359535.1-201ENST00000612100 1087 ntBASIC3.91□□□□□ -1.78
PTPN6P29350 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.91□□□□□ -1.78
PTPN6P29350 AL773545.4-201ENST00000637262 310 ntBASIC3.91□□□□□ -1.78
PTPN6P29350 AL513478.4-201ENST00000641636 310 ntBASIC3.91□□□□□ -1.78
PTPN6P29350 AC106871.1-201ENST00000568324 3102 ntBASIC3.91□□□□□ -1.78
PTPN6P29350 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PTPN6P29350 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PTPN6P29350 LINC02471-203ENST00000641941 4752 ntBASIC3.91□□□□□ -1.78
PTPN6P29350 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
PTPN6P29350 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.9□□□□□ -1.78
PTPN6P29350 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
PTPN6P29350 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
PTPN6P29350 MTCO1P4-201ENST00000520516 1409 ntBASIC3.9□□□□□ -1.78
PTPN6P29350 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.9□□□□□ -1.79
PTPN6P29350 MIR383-201ENST00000362257 73 ntBASIC3.9□□□□□ -1.79
PTPN6P29350 MIR525-201ENST00000384978 85 ntBASIC3.9□□□□□ -1.79
PTPN6P29350 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PTPN6P29350 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PTPN6P29350 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.9□□□□□ -1.79
PTPN6P29350 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PTPN6P29350 RPS15AP40-201ENST00000419621 391 ntBASIC3.9□□□□□ -1.79
PTPN6P29350 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.9□□□□□ -1.79
PTPN6P29350 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.9□□□□□ -1.79
PTPN6P29350 UBE2D3P3-201ENST00000426992 425 ntBASIC3.9□□□□□ -1.79
PTPN6P29350 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.9□□□□□ -1.79
PTPN6P29350 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PTPN6P29350 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.9□□□□□ -1.79
PTPN6P29350 AC009263.1-201ENST00000441193 1239 ntBASIC3.9□□□□□ -1.79
PTPN6P29350 AC104306.1-201ENST00000449702 371 ntBASIC3.9□□□□□ -1.79
PTPN6P29350 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.9□□□□□ -1.79
PTPN6P29350 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PTPN6P29350 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.9□□□□□ -1.79
PTPN6P29350 RNA5SP246-201ENST00000458909 119 ntBASIC3.9□□□□□ -1.79
PTPN6P29350 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.9□□□□□ -1.79
PTPN6P29350 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.9□□□□□ -1.79
PTPN6P29350 AC121161.1-201ENST00000510606 652 ntBASIC3.9□□□□□ -1.79
PTPN6P29350 KRT19P6-201ENST00000510983 209 ntBASIC3.9□□□□□ -1.79
PTPN6P29350 KCTD9P2-201ENST00000512203 1013 ntBASIC3.9□□□□□ -1.79
PTPN6P29350 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.9□□□□□ -1.79
PTPN6P29350 RNA5SP309-201ENST00000516670 106 ntBASIC3.9□□□□□ -1.79
PTPN6P29350 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.9□□□□□ -1.79
PTPN6P29350 AP003730.1-201ENST00000524605 285 ntBASIC3.9□□□□□ -1.79
PTPN6P29350 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.9□□□□□ -1.79
PTPN6P29350 OR4R2P-201ENST00000530815 597 ntBASIC3.9□□□□□ -1.79
PTPN6P29350 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.9□□□□□ -1.79
PTPN6P29350 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.9□□□□□ -1.79
PTPN6P29350 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.9□□□□□ -1.79
PTPN6P29350 AC095057.3-201ENST00000567102 1157 ntBASIC3.9□□□□□ -1.79
PTPN6P29350 AC104662.1-201ENST00000604448 511 ntBASIC3.9□□□□□ -1.79
PTPN6P29350 AC114878.2-201ENST00000604863 1251 ntBASIC3.9□□□□□ -1.79
PTPN6P29350 AC112503.2-201ENST00000609005 552 ntBASIC3.9□□□□□ -1.79
PTPN6P29350 AC121761.2-201ENST00000617300 689 ntBASIC3.9□□□□□ -1.79
PTPN6P29350 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.9□□□□□ -1.79
PTPN6P29350 AC018926.3-201ENST00000618841 406 ntBASIC3.9□□□□□ -1.79
PTPN6P29350 AC138649.5-201ENST00000637456 137 ntBASIC3.9□□□□□ -1.79
PTPN6P29350 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms