Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AL512506.1-201ENST00000613918 449 ntBASIC4.2□□□□□ -1.74
HLA-DPA1P20036 SNX18P1Y-201ENST00000616231 511 ntBASIC4.2□□□□□ -1.74
HLA-DPA1P20036 AC020923.1-201ENST00000624021 917 ntBASIC4.2□□□□□ -1.74
HLA-DPA1P20036 AC097372.4-201ENST00000625025 466 ntBASIC4.2□□□□□ -1.74
HLA-DPA1P20036 AC068620.4-201ENST00000636730 1182 ntBASIC4.2□□□□□ -1.74
HLA-DPA1P20036 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DPA1P20036 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DPA1P20036 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
HLA-DPA1P20036 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DPA1P20036 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-DPA1P20036 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-DPA1P20036 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-DPA1P20036 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-DPA1P20036 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.19□□□□□ -1.74
HLA-DPA1P20036 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.19□□□□□ -1.74
HLA-DPA1P20036 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-DPA1P20036 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
HLA-DPA1P20036 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-DPA1P20036 AC007685.1-201ENST00000329806 452 ntBASIC4.19□□□□□ -1.74
HLA-DPA1P20036 RNA5SP52-201ENST00000362448 134 ntBASIC4.19□□□□□ -1.74
HLA-DPA1P20036 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.19□□□□□ -1.74
HLA-DPA1P20036 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.19□□□□□ -1.74
HLA-DPA1P20036 BX664727.1-201ENST00000416024 466 ntBASIC4.19□□□□□ -1.74
HLA-DPA1P20036 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.19□□□□□ -1.74
HLA-DPA1P20036 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.19□□□□□ -1.74
HLA-DPA1P20036 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.19□□□□□ -1.74
HLA-DPA1P20036 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.19□□□□□ -1.74
HLA-DPA1P20036 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.19□□□□□ -1.74
HLA-DPA1P20036 AL138799.3-201ENST00000438968 350 ntBASIC4.19□□□□□ -1.74
HLA-DPA1P20036 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.19□□□□□ -1.74
HLA-DPA1P20036 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.19□□□□□ -1.74
HLA-DPA1P20036 AF213884.1-201ENST00000488102 463 ntBASIC4.19□□□□□ -1.74
HLA-DPA1P20036 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-DPA1P20036 AP003049.1-201ENST00000529418 457 ntBASIC4.19□□□□□ -1.74
HLA-DPA1P20036 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.19□□□□□ -1.74
HLA-DPA1P20036 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.19□□□□□ -1.74
HLA-DPA1P20036 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.19□□□□□ -1.74
HLA-DPA1P20036 RN7SL622P-201ENST00000585292 275 ntBASIC4.19□□□□□ -1.74
HLA-DPA1P20036 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.19□□□□□ -1.74
HLA-DPA1P20036 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.19□□□□□ -1.74
HLA-DPA1P20036 AC078899.5-201ENST00000612475 178 ntBASIC4.19□□□□□ -1.74
HLA-DPA1P20036 MIR8059-201ENST00000620427 81 ntBASIC4.19□□□□□ -1.74
HLA-DPA1P20036 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
HLA-DPA1P20036 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.19□□□□□ -1.74
HLA-DPA1P20036 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.19□□□□□ -1.74
HLA-DPA1P20036 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.19□□□□□ -1.74
HLA-DPA1P20036 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-DPA1P20036 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-DPA1P20036 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-DPA1P20036 MTCO1P4-201ENST00000520516 1409 ntBASIC4.19□□□□□ -1.74
HLA-DPA1P20036 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-DPA1P20036 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.19□□□□□ -1.74
HLA-DPA1P20036 AC026951.1-201ENST00000559530 2459 ntBASIC4.18□□□□□ -1.74
HLA-DPA1P20036 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DPA1P20036 LARP1BP1-201ENST00000506036 1359 ntBASIC4.18□□□□□ -1.74
HLA-DPA1P20036 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.18□□□□□ -1.74
HLA-DPA1P20036 PABPC1P7-201ENST00000413177 1513 ntBASIC4.18□□□□□ -1.74
HLA-DPA1P20036 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.18□□□□□ -1.74
HLA-DPA1P20036 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DPA1P20036 MIR1250-201ENST00000408098 113 ntBASIC4.18□□□□□ -1.74
HLA-DPA1P20036 USP9YP19-201ENST00000412165 485 ntBASIC4.18□□□□□ -1.74
HLA-DPA1P20036 AC246680.2-201ENST00000422106 389 ntBASIC4.18□□□□□ -1.74
HLA-DPA1P20036 RPL23AP38-201ENST00000423801 469 ntBASIC4.18□□□□□ -1.74
HLA-DPA1P20036 AL009174.1-201ENST00000426577 416 ntBASIC4.18□□□□□ -1.74
HLA-DPA1P20036 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.18□□□□□ -1.74
HLA-DPA1P20036 AC091390.1-201ENST00000433904 331 ntBASIC4.18□□□□□ -1.74
HLA-DPA1P20036 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.18□□□□□ -1.74
HLA-DPA1P20036 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.18□□□□□ -1.74
HLA-DPA1P20036 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.18□□□□□ -1.74
HLA-DPA1P20036 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.18□□□□□ -1.74
HLA-DPA1P20036 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.18□□□□□ -1.74
HLA-DPA1P20036 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.18□□□□□ -1.74
HLA-DPA1P20036 PRELID3BP5-201ENST00000508612 460 ntBASIC4.18□□□□□ -1.74
HLA-DPA1P20036 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DPA1P20036 MTCO1P30-201ENST00000515244 580 ntBASIC4.18□□□□□ -1.74
HLA-DPA1P20036 PRELID3BP4-201ENST00000515476 571 ntBASIC4.18□□□□□ -1.74
HLA-DPA1P20036 RNU6-416P-201ENST00000516265 103 ntBASIC4.18□□□□□ -1.74
HLA-DPA1P20036 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.18□□□□□ -1.74
HLA-DPA1P20036 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.18□□□□□ -1.74
HLA-DPA1P20036 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.18□□□□□ -1.74
HLA-DPA1P20036 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.18□□□□□ -1.74
HLA-DPA1P20036 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.18□□□□□ -1.74
HLA-DPA1P20036 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.18□□□□□ -1.74
HLA-DPA1P20036 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.18□□□□□ -1.74
HLA-DPA1P20036 MIR3138-201ENST00000585238 82 ntBASIC4.18□□□□□ -1.74
HLA-DPA1P20036 AC010928.3-201ENST00000587712 541 ntBASIC4.18□□□□□ -1.74
HLA-DPA1P20036 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.18□□□□□ -1.74
HLA-DPA1P20036 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.18□□□□□ -1.74
HLA-DPA1P20036 AC098483.2-201ENST00000603158 454 ntBASIC4.18□□□□□ -1.74
HLA-DPA1P20036 AL590392.1-201ENST00000604960 446 ntBASIC4.18□□□□□ -1.74
HLA-DPA1P20036 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.18□□□□□ -1.74
HLA-DPA1P20036 OR52H1-202ENST00000641796 1061 ntBASIC4.18□□□□□ -1.74
HLA-DPA1P20036 AC097504.1-201ENST00000515103 2415 ntBASIC4.18□□□□□ -1.74
HLA-DPA1P20036 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
HLA-DPA1P20036 MARK2P15-201ENST00000432204 2186 ntBASIC4.17□□□□□ -1.74
HLA-DPA1P20036 AC005261.4-201ENST00000600047 1385 ntBASIC4.17□□□□□ -1.74
HLA-DPA1P20036 AC116667.1-201ENST00000604855 2072 ntBASIC4.17□□□□□ -1.74
HLA-DPA1P20036 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.17□□□□□ -1.74
HLA-DPA1P20036 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
HLA-DPA1P20036 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms