Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
ERCC3P19447 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.4□□□□□ -1.38
ERCC3P19447 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
ERCC3P19447 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
ERCC3P19447 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
ERCC3P19447 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
ERCC3P19447 RNY4P24-201ENST00000362735 96 ntBASIC6.4□□□□□ -1.38
ERCC3P19447 U8.4-201ENST00000363626 134 ntBASIC6.4□□□□□ -1.38
ERCC3P19447 RNU1-130P-201ENST00000363930 160 ntBASIC6.4□□□□□ -1.38
ERCC3P19447 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
ERCC3P19447 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC6.4□□□□□ -1.38
ERCC3P19447 MIR551A-201ENST00000385042 96 ntBASIC6.4□□□□□ -1.38
ERCC3P19447 BTBD10P2-201ENST00000404779 676 ntBASIC6.4□□□□□ -1.38
ERCC3P19447 RNU6-248P-201ENST00000410720 107 ntBASIC6.4□□□□□ -1.38
ERCC3P19447 C1DP2-201ENST00000418167 426 ntBASIC6.4□□□□□ -1.38
ERCC3P19447 EIF1P1-201ENST00000421436 341 ntBASIC6.4□□□□□ -1.38
ERCC3P19447 OR8F1P-201ENST00000425243 930 ntBASIC6.4□□□□□ -1.38
ERCC3P19447 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.4□□□□□ -1.38
ERCC3P19447 AL139415.2-201ENST00000431968 163 ntBASIC6.4□□□□□ -1.38
ERCC3P19447 AC073410.1-201ENST00000435125 589 ntBASIC6.4□□□□□ -1.38
ERCC3P19447 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.4□□□□□ -1.38
ERCC3P19447 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.4□□□□□ -1.38
ERCC3P19447 GAPDHP14-201ENST00000450472 937 ntBASIC6.4□□□□□ -1.38
ERCC3P19447 RPS20P32-201ENST00000456044 356 ntBASIC6.4□□□□□ -1.38
ERCC3P19447 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC6.4□□□□□ -1.38
ERCC3P19447 ATP5LP5-201ENST00000483050 299 ntBASIC6.4□□□□□ -1.38
ERCC3P19447 AC093267.1-201ENST00000489176 961 ntBASIC6.4□□□□□ -1.38
ERCC3P19447 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
ERCC3P19447 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC6.4□□□□□ -1.38
ERCC3P19447 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.4□□□□□ -1.38
ERCC3P19447 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.4□□□□□ -1.38
ERCC3P19447 AC087481.2-201ENST00000565492 330 ntBASIC6.4□□□□□ -1.38
ERCC3P19447 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC6.4□□□□□ -1.38
ERCC3P19447 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC6.4□□□□□ -1.38
ERCC3P19447 MIR4311-201ENST00000580794 100 ntBASIC6.4□□□□□ -1.38
ERCC3P19447 YWHAQP7-201ENST00000603536 658 ntBASIC6.4□□□□□ -1.38
ERCC3P19447 AL009028.1-201ENST00000604895 802 ntBASIC6.4□□□□□ -1.38
ERCC3P19447 AC090578.1-201ENST00000604955 591 ntBASIC6.4□□□□□ -1.38
ERCC3P19447 BCRP9-201ENST00000605312 388 ntBASIC6.4□□□□□ -1.38
ERCC3P19447 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.4□□□□□ -1.38
ERCC3P19447 AC007684.1-201ENST00000609671 477 ntBASIC6.4□□□□□ -1.38
ERCC3P19447 AL136295.6-201ENST00000610486 658 ntBASIC6.4□□□□□ -1.38
ERCC3P19447 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC6.4□□□□□ -1.38
ERCC3P19447 AC072046.2-201ENST00000618366 268 ntBASIC6.4□□□□□ -1.38
ERCC3P19447 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
ERCC3P19447 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC6.4□□□□□ -1.38
ERCC3P19447 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
ERCC3P19447 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
ERCC3P19447 AL445437.1-201ENST00000623157 3087 ntBASIC6.4□□□□□ -1.39
ERCC3P19447 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
ERCC3P19447 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
ERCC3P19447 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
ERCC3P19447 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ERCC3P19447 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
ERCC3P19447 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
ERCC3P19447 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ERCC3P19447 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.39□□□□□ -1.39
ERCC3P19447 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ERCC3P19447 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC6.39□□□□□ -1.39
ERCC3P19447 RPL23P2-201ENST00000320371 421 ntBASIC6.39□□□□□ -1.39
ERCC3P19447 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.39□□□□□ -1.39
ERCC3P19447 RN7SKP224-201ENST00000364140 325 ntBASIC6.39□□□□□ -1.39
ERCC3P19447 RN7SKP226-201ENST00000364912 300 ntBASIC6.39□□□□□ -1.39
ERCC3P19447 Y_RNA.296-201ENST00000364930 108 ntBASIC6.39□□□□□ -1.39
ERCC3P19447 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.39□□□□□ -1.39
ERCC3P19447 RN7SKP213-201ENST00000410746 298 ntBASIC6.39□□□□□ -1.39
ERCC3P19447 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC6.39□□□□□ -1.39
ERCC3P19447 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ERCC3P19447 OR4F13P-201ENST00000428478 931 ntBASIC6.39□□□□□ -1.39
ERCC3P19447 RSU1P2-202ENST00000437884 485 ntBASIC6.39□□□□□ -1.39
ERCC3P19447 RPL12P3-201ENST00000440080 396 ntBASIC6.39□□□□□ -1.39
ERCC3P19447 PTMAP3-201ENST00000447474 330 ntBASIC6.39□□□□□ -1.39
ERCC3P19447 RPS20P21-201ENST00000466859 343 ntBASIC6.39□□□□□ -1.39
ERCC3P19447 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
ERCC3P19447 RPSAP50-201ENST00000481955 852 ntBASIC6.39□□□□□ -1.39
ERCC3P19447 AC013356.1-201ENST00000489027 564 ntBASIC6.39□□□□□ -1.39
ERCC3P19447 RPS23P1-201ENST00000491662 432 ntBASIC6.39□□□□□ -1.39
ERCC3P19447 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.39□□□□□ -1.39
ERCC3P19447 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC6.39□□□□□ -1.39
ERCC3P19447 snoU109.5-201ENST00000516231 132 ntBASIC6.39□□□□□ -1.39
ERCC3P19447 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC6.39□□□□□ -1.39
ERCC3P19447 EEF1B2P4-201ENST00000551398 348 ntBASIC6.39□□□□□ -1.39
ERCC3P19447 RPL21P5-201ENST00000554662 472 ntBASIC6.39□□□□□ -1.39
ERCC3P19447 AL133241.1-201ENST00000556832 487 ntBASIC6.39□□□□□ -1.39
ERCC3P19447 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC6.39□□□□□ -1.39
ERCC3P19447 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.39□□□□□ -1.39
ERCC3P19447 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.39□□□□□ -1.39
ERCC3P19447 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ERCC3P19447 MIR4512-201ENST00000583257 77 ntBASIC6.39□□□□□ -1.39
ERCC3P19447 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC6.39□□□□□ -1.39
ERCC3P19447 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.39□□□□□ -1.39
ERCC3P19447 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.39□□□□□ -1.39
ERCC3P19447 AL359999.1-201ENST00000604513 294 ntBASIC6.39□□□□□ -1.39
ERCC3P19447 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ERCC3P19447 AL390208.1-201ENST00000605885 644 ntBASIC6.39□□□□□ -1.39
ERCC3P19447 AC113194.1-201ENST00000606037 500 ntBASIC6.39□□□□□ -1.39
ERCC3P19447 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ERCC3P19447 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ERCC3P19447 WT1-AS_8.1-201ENST00000615200 275 ntBASIC6.39□□□□□ -1.39
ERCC3P19447 AC090510.2-201ENST00000617465 629 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms