Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
CD44P16070 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC8.03□□□□□ -1.12
CD44P16070 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CD44P16070 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC8.03□□□□□ -1.12
CD44P16070 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CD44P16070 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
CD44P16070 MTND5P35-201ENST00000557537 1720 ntBASIC8.03□□□□□ -1.12
CD44P16070 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC8.03□□□□□ -1.12
CD44P16070 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
CD44P16070 EXOC5P1-201ENST00000510543 1969 ntBASIC8.02□□□□□ -1.12
CD44P16070 NCOA4P3-201ENST00000513203 1877 ntBASIC8.02□□□□□ -1.12
CD44P16070 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC8.02□□□□□ -1.13
CD44P16070 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CD44P16070 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
CD44P16070 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC8.02□□□□□ -1.13
CD44P16070 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC8.02□□□□□ -1.13
CD44P16070 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CD44P16070 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC8.02□□□□□ -1.13
CD44P16070 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CD44P16070 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CD44P16070 SNORD63-201ENST00000384262 68 ntBASIC8.02□□□□□ -1.13
CD44P16070 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
CD44P16070 RPL24-201ENST00000394077 623 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CD44P16070 AC096921.1-201ENST00000411661 375 ntBASIC8.02□□□□□ -1.13
CD44P16070 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC8.02□□□□□ -1.13
CD44P16070 EEF1GP7-201ENST00000422983 703 ntBASIC8.02□□□□□ -1.13
CD44P16070 GAPDHP69-201ENST00000425504 1008 ntBASIC8.02□□□□□ -1.13
CD44P16070 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC8.02□□□□□ -1.13
CD44P16070 LINC00578-201ENST00000439009 542 ntTSL 4 BASIC8.02□□□□□ -1.13
CD44P16070 AP001025.1-201ENST00000486139 332 ntBASIC8.02□□□□□ -1.13
CD44P16070 AC026826.1-201ENST00000493002 361 ntBASIC8.02□□□□□ -1.13
CD44P16070 AP003084.1-201ENST00000524828 742 ntBASIC8.02□□□□□ -1.13
CD44P16070 AC005868.1-201ENST00000536421 331 ntBASIC8.02□□□□□ -1.13
CD44P16070 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC8.02□□□□□ -1.13
CD44P16070 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC8.02□□□□□ -1.13
CD44P16070 BOLA2P1-201ENST00000584794 232 ntBASIC8.02□□□□□ -1.13
CD44P16070 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC8.02□□□□□ -1.13
CD44P16070 AL355333.1-201ENST00000605632 279 ntBASIC8.02□□□□□ -1.13
CD44P16070 MIR3976-201ENST00000606807 139 ntBASIC8.02□□□□□ -1.13
CD44P16070 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC8.02□□□□□ -1.13
CD44P16070 AC023043.4-201ENST00000612081 449 ntBASIC8.02□□□□□ -1.13
CD44P16070 MIR7973-1-201ENST00000614683 76 ntBASIC8.02□□□□□ -1.13
CD44P16070 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC8.02□□□□□ -1.13
CD44P16070 AC012629.3-201ENST00000623397 328 ntBASIC8.02□□□□□ -1.13
CD44P16070 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC8.02□□□□□ -1.13
CD44P16070 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CD44P16070 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CD44P16070 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CD44P16070 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CD44P16070 Z97989.1-201ENST00000531702 2421 ntBASIC8.02□□□□□ -1.13
CD44P16070 ST7-213ENST00000432298 1956 ntTSL 2 BASIC8.02□□□□□ -1.13
CD44P16070 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
CD44P16070 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CD44P16070 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
CD44P16070 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CD44P16070 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CD44P16070 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
CD44P16070 AL133243.4-201ENST00000623116 3109 ntBASIC8.01□□□□□ -1.13
CD44P16070 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CD44P16070 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CD44P16070 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC8.01□□□□□ -1.13
CD44P16070 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CD44P16070 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CD44P16070 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CD44P16070 XIAPP3-201ENST00000312918 795 ntBASIC8.01□□□□□ -1.13
CD44P16070 Y_RNA.116-201ENST00000363292 103 ntBASIC8.01□□□□□ -1.13
CD44P16070 RN7SKP211-201ENST00000363328 315 ntBASIC8.01□□□□□ -1.13
CD44P16070 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
CD44P16070 ISY1-202ENST00000393292 988 ntTSL 5 BASIC8.01□□□□□ -1.13
CD44P16070 CES5AP1-201ENST00000400418 859 ntBASIC8.01□□□□□ -1.13
CD44P16070 RNA5SP111-201ENST00000411386 101 ntBASIC8.01□□□□□ -1.13
CD44P16070 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC8.01□□□□□ -1.13
CD44P16070 RPS15AP6-201ENST00000420703 385 ntBASIC8.01□□□□□ -1.13
CD44P16070 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CD44P16070 OR3B1P-201ENST00000437536 893 ntBASIC8.01□□□□□ -1.13
CD44P16070 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC8.01□□□□□ -1.13
CD44P16070 ATP5G1P6-201ENST00000451206 412 ntBASIC8.01□□□□□ -1.13
CD44P16070 AL390728.3-201ENST00000452704 270 ntBASIC8.01□□□□□ -1.13
CD44P16070 AC013429.1-201ENST00000456604 422 ntBASIC8.01□□□□□ -1.13
CD44P16070 RN7SL58P-201ENST00000473445 294 ntBASIC8.01□□□□□ -1.13
CD44P16070 AC008040.4-201ENST00000494834 768 ntBASIC8.01□□□□□ -1.13
CD44P16070 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC8.01□□□□□ -1.13
CD44P16070 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC8.01□□□□□ -1.13
CD44P16070 AC044860.3-201ENST00000559957 368 ntBASIC8.01□□□□□ -1.13
CD44P16070 AC007614.1-201ENST00000566607 309 ntTSL 3 BASIC8.01□□□□□ -1.13
CD44P16070 USP2-AS1-205ENST00000578923 895 ntTSL 2 BASIC8.01□□□□□ -1.13
CD44P16070 SNRPCP20-201ENST00000588011 210 ntBASIC8.01□□□□□ -1.13
CD44P16070 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC8.01□□□□□ -1.13
CD44P16070 BRDTP1-201ENST00000605735 677 ntBASIC8.01□□□□□ -1.13
CD44P16070 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC8.01□□□□□ -1.13
CD44P16070 AL121809.2-201ENST00000613169 341 ntBASIC8.01□□□□□ -1.13
CD44P16070 AC130448.2-201ENST00000624082 374 ntBASIC8.01□□□□□ -1.13
CD44P16070 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC8.01□□□□□ -1.13
CD44P16070 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
CD44P16070 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC8.01□□□□□ -1.13
CD44P16070 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CD44P16070 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
CD44P16070 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC8.01□□□□□ -1.13
CD44P16070 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC8.01□□□□□ -1.13
CD44P16070 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms