Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AL352979.3-201ENST00000553515 247 ntBASIC4.46□□□□□ -1.7
PCNAP12004 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.46□□□□□ -1.7
PCNAP12004 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.46□□□□□ -1.7
PCNAP12004 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.46□□□□□ -1.7
PCNAP12004 AL354943.1-201ENST00000572103 781 ntBASIC4.46□□□□□ -1.7
PCNAP12004 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.46□□□□□ -1.7
PCNAP12004 MRPS35P3-201ENST00000603189 709 ntBASIC4.46□□□□□ -1.7
PCNAP12004 AC023158.2-201ENST00000614876 543 ntBASIC4.46□□□□□ -1.7
PCNAP12004 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.46□□□□□ -1.7
PCNAP12004 AL356121.2-201ENST00000624715 780 ntBASIC4.46□□□□□ -1.7
PCNAP12004 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.46□□□□□ -1.7
PCNAP12004 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.46□□□□□ -1.7
PCNAP12004 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
PCNAP12004 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.46□□□□□ -1.7
PCNAP12004 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PCNAP12004 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCNAP12004 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCNAP12004 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCNAP12004 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.45□□□□□ -1.7
PCNAP12004 EOGT-210ENST00000615922 1931 ntBASIC4.45□□□□□ -1.7
PCNAP12004 SNORD113-6-201ENST00000363345 75 ntBASIC4.45□□□□□ -1.7
PCNAP12004 SNORA71.2-201ENST00000364941 134 ntBASIC4.45□□□□□ -1.7
PCNAP12004 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PCNAP12004 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCNAP12004 AC119751.3-201ENST00000399720 670 ntBASIC4.45□□□□□ -1.7
PCNAP12004 PRRC2CP1-201ENST00000404428 159 ntBASIC4.45□□□□□ -1.7
PCNAP12004 AL133264.1-201ENST00000407157 562 ntBASIC4.45□□□□□ -1.7
PCNAP12004 AL139098.1-201ENST00000407291 389 ntBASIC4.45□□□□□ -1.7
PCNAP12004 RN7SKP100-201ENST00000411258 284 ntBASIC4.45□□□□□ -1.7
PCNAP12004 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.45□□□□□ -1.7
PCNAP12004 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.45□□□□□ -1.7
PCNAP12004 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.45□□□□□ -1.7
PCNAP12004 AC004448.2-201ENST00000422360 586 ntBASIC4.45□□□□□ -1.7
PCNAP12004 Z74021.1-201ENST00000423610 407 ntBASIC4.45□□□□□ -1.7
PCNAP12004 AL138785.1-201ENST00000425821 331 ntBASIC4.45□□□□□ -1.7
PCNAP12004 AL590762.4-201ENST00000425885 253 ntBASIC4.45□□□□□ -1.7
PCNAP12004 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.45□□□□□ -1.7
PCNAP12004 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
PCNAP12004 HMGB1P48-201ENST00000446155 598 ntBASIC4.45□□□□□ -1.7
PCNAP12004 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.45□□□□□ -1.7
PCNAP12004 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PCNAP12004 NF1P3-201ENST00000457709 450 ntBASIC4.45□□□□□ -1.7
PCNAP12004 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.45□□□□□ -1.7
PCNAP12004 AC108734.3-201ENST00000481241 1165 ntBASIC4.45□□□□□ -1.7
PCNAP12004 VPS26AP1-201ENST00000483197 979 ntBASIC4.45□□□□□ -1.7
PCNAP12004 AC083982.1-201ENST00000485679 344 ntBASIC4.45□□□□□ -1.7
PCNAP12004 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.45□□□□□ -1.7
PCNAP12004 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.45□□□□□ -1.7
PCNAP12004 AC021146.8-201ENST00000507455 733 ntBASIC4.45□□□□□ -1.7
PCNAP12004 OR7H2P-201ENST00000513483 306 ntBASIC4.45□□□□□ -1.7
PCNAP12004 SNORA3.4-201ENST00000515969 96 ntBASIC4.45□□□□□ -1.7
PCNAP12004 RNA5SP135-201ENST00000517019 125 ntBASIC4.45□□□□□ -1.7
PCNAP12004 AC087808.1-201ENST00000520501 361 ntBASIC4.45□□□□□ -1.7
PCNAP12004 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.45□□□□□ -1.7
PCNAP12004 PDCL2P2-201ENST00000533651 189 ntBASIC4.45□□□□□ -1.7
PCNAP12004 AL110118.1-201ENST00000553543 400 ntBASIC4.45□□□□□ -1.7
PCNAP12004 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.45□□□□□ -1.7
PCNAP12004 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.45□□□□□ -1.7
PCNAP12004 UBE2FP2-201ENST00000566646 462 ntBASIC4.45□□□□□ -1.7
PCNAP12004 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.45□□□□□ -1.7
PCNAP12004 AC091042.1-201ENST00000579213 173 ntBASIC4.45□□□□□ -1.7
PCNAP12004 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.45□□□□□ -1.7
PCNAP12004 MIR4512-201ENST00000583257 77 ntBASIC4.45□□□□□ -1.7
PCNAP12004 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
PCNAP12004 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.45□□□□□ -1.7
PCNAP12004 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.45□□□□□ -1.7
PCNAP12004 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.45□□□□□ -1.7
PCNAP12004 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC4.45□□□□□ -1.7
PCNAP12004 AC124312.6-202ENST00000623624 418 ntBASIC4.45□□□□□ -1.7
PCNAP12004 U3.53-201ENST00000628922 216 ntBASIC4.45□□□□□ -1.7
PCNAP12004 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.45□□□□□ -1.7
PCNAP12004 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.45□□□□□ -1.7
PCNAP12004 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PCNAP12004 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCNAP12004 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
PCNAP12004 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.45□□□□□ -1.7
PCNAP12004 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PCNAP12004 AC010928.1-201ENST00000592477 1447 ntBASIC4.45□□□□□ -1.7
PCNAP12004 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCNAP12004 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
PCNAP12004 AC095050.2-201ENST00000510748 1458 ntBASIC4.44□□□□□ -1.7
PCNAP12004 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.44□□□□□ -1.7
PCNAP12004 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.44□□□□□ -1.7
PCNAP12004 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.44□□□□□ -1.7
PCNAP12004 XIAPP3-201ENST00000312918 795 ntBASIC4.44□□□□□ -1.7
PCNAP12004 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
PCNAP12004 RNU6-560P-201ENST00000364007 108 ntBASIC4.44□□□□□ -1.7
PCNAP12004 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCNAP12004 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.44□□□□□ -1.7
PCNAP12004 AL603766.1-201ENST00000407763 664 ntBASIC4.44□□□□□ -1.7
PCNAP12004 RNU2-42P-201ENST00000410697 113 ntBASIC4.44□□□□□ -1.7
PCNAP12004 AL136133.1-201ENST00000413694 376 ntBASIC4.44□□□□□ -1.7
PCNAP12004 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.44□□□□□ -1.7
PCNAP12004 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.44□□□□□ -1.7
PCNAP12004 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.44□□□□□ -1.7
PCNAP12004 MRPS36P1-201ENST00000421291 307 ntBASIC4.44□□□□□ -1.7
PCNAP12004 AC009237.2-201ENST00000421358 284 ntBASIC4.44□□□□□ -1.7
PCNAP12004 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.44□□□□□ -1.7
PCNAP12004 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.44□□□□□ -1.7
PCNAP12004 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 169.3 ms