Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AC114878.1-201ENST00000441166 358 ntBASIC3.73□□□□□ -1.81
HOXC4P09017 Z99127.2-201ENST00000441426 334 ntBASIC3.73□□□□□ -1.81
HOXC4P09017 AL627224.1-201ENST00000448334 444 ntBASIC3.73□□□□□ -1.81
HOXC4P09017 HMGB3P22-202ENST00000451823 572 ntBASIC3.73□□□□□ -1.81
HOXC4P09017 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.73□□□□□ -1.81
HOXC4P09017 PCNAP1-201ENST00000505363 709 ntBASIC3.73□□□□□ -1.81
HOXC4P09017 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.73□□□□□ -1.81
HOXC4P09017 AC026726.1-201ENST00000512859 601 ntBASIC3.73□□□□□ -1.81
HOXC4P09017 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.73□□□□□ -1.81
HOXC4P09017 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.73□□□□□ -1.81
HOXC4P09017 AC026403.1-201ENST00000518938 295 ntBASIC3.73□□□□□ -1.81
HOXC4P09017 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.73□□□□□ -1.81
HOXC4P09017 AC022695.1-201ENST00000522089 237 ntBASIC3.73□□□□□ -1.81
HOXC4P09017 AC008083.2-201ENST00000546707 476 ntBASIC3.73□□□□□ -1.81
HOXC4P09017 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.73□□□□□ -1.81
HOXC4P09017 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.73□□□□□ -1.81
HOXC4P09017 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HOXC4P09017 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HOXC4P09017 AC024933.1-201ENST00000608472 348 ntBASIC3.73□□□□□ -1.81
HOXC4P09017 AC135803.1-201ENST00000608748 565 ntBASIC3.73□□□□□ -1.81
HOXC4P09017 AC139769.3-201ENST00000618383 175 ntBASIC3.73□□□□□ -1.81
HOXC4P09017 AC080188.3-201ENST00000624842 748 ntBASIC3.73□□□□□ -1.81
HOXC4P09017 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.73□□□□□ -1.81
HOXC4P09017 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HOXC4P09017 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.73□□□□□ -1.81
HOXC4P09017 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HOXC4P09017 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
HOXC4P09017 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HOXC4P09017 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HOXC4P09017 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HOXC4P09017 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXC4P09017 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
HOXC4P09017 AC007529.1-201ENST00000418574 2178 ntBASIC3.72□□□□□ -1.81
HOXC4P09017 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.72□□□□□ -1.81
HOXC4P09017 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXC4P09017 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HOXC4P09017 ZNF285B-201ENST00000561698 1767 ntBASIC3.72□□□□□ -1.81
HOXC4P09017 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.72□□□□□ -1.81
HOXC4P09017 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
HOXC4P09017 AC007066.1-201ENST00000392902 381 ntBASIC3.72□□□□□ -1.81
HOXC4P09017 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
HOXC4P09017 HLFP1-201ENST00000402375 499 ntBASIC3.72□□□□□ -1.81
HOXC4P09017 RNU2-72P-201ENST00000411175 163 ntBASIC3.72□□□□□ -1.81
HOXC4P09017 MTND2P9-201ENST00000422293 931 ntBASIC3.72□□□□□ -1.81
HOXC4P09017 AC009965.2-201ENST00000425328 970 ntBASIC3.72□□□□□ -1.81
HOXC4P09017 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXC4P09017 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HOXC4P09017 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HOXC4P09017 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXC4P09017 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXC4P09017 AC098824.1-201ENST00000453565 980 ntBASIC3.72□□□□□ -1.81
HOXC4P09017 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.72□□□□□ -1.81
HOXC4P09017 AC022034.3-201ENST00000471393 478 ntBASIC3.72□□□□□ -1.81
HOXC4P09017 HMGN1P11-201ENST00000508668 303 ntBASIC3.72□□□□□ -1.81
HOXC4P09017 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXC4P09017 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.72□□□□□ -1.81
HOXC4P09017 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
HOXC4P09017 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.72□□□□□ -1.81
HOXC4P09017 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
HOXC4P09017 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
HOXC4P09017 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.72□□□□□ -1.81
HOXC4P09017 AGGF1P8-201ENST00000562979 1000 ntBASIC3.72□□□□□ -1.81
HOXC4P09017 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXC4P09017 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.72□□□□□ -1.81
HOXC4P09017 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.72□□□□□ -1.81
HOXC4P09017 AC008739.3-201ENST00000603262 127 ntBASIC3.72□□□□□ -1.81
HOXC4P09017 AL158211.2-201ENST00000607282 395 ntBASIC3.72□□□□□ -1.81
HOXC4P09017 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXC4P09017 AC104307.1-201ENST00000616142 196 ntBASIC3.72□□□□□ -1.81
HOXC4P09017 AC253576.2-201ENST00000618815 580 ntBASIC3.72□□□□□ -1.81
HOXC4P09017 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXC4P09017 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HOXC4P09017 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.72□□□□□ -1.81
HOXC4P09017 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
HOXC4P09017 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
HOXC4P09017 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HOXC4P09017 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXC4P09017 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXC4P09017 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.71□□□□□ -1.81
HOXC4P09017 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HOXC4P09017 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HOXC4P09017 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
HOXC4P09017 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HOXC4P09017 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXC4P09017 RNA5SP322-201ENST00000363617 119 ntBASIC3.71□□□□□ -1.82
HOXC4P09017 SNORA73.2-201ENST00000364946 201 ntBASIC3.71□□□□□ -1.82
HOXC4P09017 SNORA5A-201ENST00000384111 134 ntBASIC3.71□□□□□ -1.82
HOXC4P09017 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
HOXC4P09017 RNA5SP424-201ENST00000390988 115 ntBASIC3.71□□□□□ -1.82
HOXC4P09017 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.71□□□□□ -1.82
HOXC4P09017 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.71□□□□□ -1.82
HOXC4P09017 SYF2P2-201ENST00000417620 583 ntBASIC3.71□□□□□ -1.82
HOXC4P09017 RNF19BPX-201ENST00000426224 625 ntBASIC3.71□□□□□ -1.82
HOXC4P09017 NDUFA5P10-201ENST00000432147 357 ntBASIC3.71□□□□□ -1.82
HOXC4P09017 RPL37P1-201ENST00000432310 284 ntBASIC3.71□□□□□ -1.82
HOXC4P09017 SNORA71B-202ENST00000439232 272 ntBASIC3.71□□□□□ -1.82
HOXC4P09017 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.71□□□□□ -1.82
HOXC4P09017 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.71□□□□□ -1.82
HOXC4P09017 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.71□□□□□ -1.82
HOXC4P09017 AC023512.1-201ENST00000444513 499 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms