Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 BX890604.2-201ENST00000427883 474 ntBASIC4.03□□□□□ -1.76
TPM3P06753 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TPM3P06753 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.03□□□□□ -1.76
TPM3P06753 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TPM3P06753 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.03□□□□□ -1.76
TPM3P06753 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.03□□□□□ -1.76
TPM3P06753 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.03□□□□□ -1.76
TPM3P06753 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.03□□□□□ -1.76
TPM3P06753 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.03□□□□□ -1.76
TPM3P06753 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.03□□□□□ -1.76
TPM3P06753 AP000919.1-202ENST00000581139 1264 ntBASIC4.03□□□□□ -1.76
TPM3P06753 AC009948.4-201ENST00000604692 675 ntBASIC4.03□□□□□ -1.76
TPM3P06753 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TPM3P06753 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.03□□□□□ -1.76
TPM3P06753 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.03□□□□□ -1.76
TPM3P06753 AC005156.1-201ENST00000613371 573 ntBASIC4.03□□□□□ -1.76
TPM3P06753 AC139769.3-201ENST00000618383 175 ntBASIC4.03□□□□□ -1.76
TPM3P06753 MIR6500-201ENST00000622700 86 ntBASIC4.03□□□□□ -1.76
TPM3P06753 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.03□□□□□ -1.76
TPM3P06753 AC118273.1-201ENST00000525324 3006 ntBASIC4.03□□□□□ -1.76
TPM3P06753 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TPM3P06753 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
TPM3P06753 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
TPM3P06753 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
TPM3P06753 AL079305.1-201ENST00000623159 3008 ntBASIC4.03□□□□□ -1.77
TPM3P06753 AC007496.3-201ENST00000624987 3443 ntBASIC4.02□□□□□ -1.77
TPM3P06753 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
TPM3P06753 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
TPM3P06753 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TPM3P06753 SNORA62-201ENST00000365493 153 ntBASIC4.02□□□□□ -1.77
TPM3P06753 RPL21P65-201ENST00000406094 466 ntBASIC4.02□□□□□ -1.77
TPM3P06753 U3.39-201ENST00000408569 239 ntBASIC4.02□□□□□ -1.77
TPM3P06753 SNORA3.3-201ENST00000408712 125 ntBASIC4.02□□□□□ -1.77
TPM3P06753 ELOCP6-201ENST00000429066 328 ntBASIC4.02□□□□□ -1.77
TPM3P06753 AL357552.1-201ENST00000445254 415 ntBASIC4.02□□□□□ -1.77
TPM3P06753 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.02□□□□□ -1.77
TPM3P06753 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TPM3P06753 HMGN1P18-201ENST00000457642 277 ntBASIC4.02□□□□□ -1.77
TPM3P06753 ELOCP12-201ENST00000458706 328 ntBASIC4.02□□□□□ -1.77
TPM3P06753 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.02□□□□□ -1.77
TPM3P06753 AC006511.1-201ENST00000470614 315 ntBASIC4.02□□□□□ -1.77
TPM3P06753 AC022034.3-201ENST00000471393 478 ntBASIC4.02□□□□□ -1.77
TPM3P06753 AC084357.1-201ENST00000473404 255 ntBASIC4.02□□□□□ -1.77
TPM3P06753 RPS4XP15-201ENST00000489210 795 ntBASIC4.02□□□□□ -1.77
TPM3P06753 FTH1P24-201ENST00000503502 462 ntBASIC4.02□□□□□ -1.77
TPM3P06753 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.02□□□□□ -1.77
TPM3P06753 KCTD9P5-201ENST00000504141 1170 ntBASIC4.02□□□□□ -1.77
TPM3P06753 AC005921.1-201ENST00000510589 286 ntBASIC4.02□□□□□ -1.77
TPM3P06753 SNORA31.9-201ENST00000516429 84 ntBASIC4.02□□□□□ -1.77
TPM3P06753 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC4.02□□□□□ -1.77
TPM3P06753 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.02□□□□□ -1.77
TPM3P06753 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.02□□□□□ -1.77
TPM3P06753 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.02□□□□□ -1.77
TPM3P06753 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.02□□□□□ -1.77
TPM3P06753 KPNA2P3-201ENST00000584190 848 ntBASIC4.02□□□□□ -1.77
TPM3P06753 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.02□□□□□ -1.77
TPM3P06753 SNORA51-201ENST00000606420 132 ntBASIC4.02□□□□□ -1.77
TPM3P06753 AC243654.2-201ENST00000612843 443 ntBASIC4.02□□□□□ -1.77
TPM3P06753 AC112484.5-201ENST00000624189 228 ntBASIC4.02□□□□□ -1.77
TPM3P06753 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.02□□□□□ -1.77
TPM3P06753 OR52H1-202ENST00000641796 1061 ntBASIC4.02□□□□□ -1.77
TPM3P06753 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TPM3P06753 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
TPM3P06753 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
TPM3P06753 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.01□□□□□ -1.77
TPM3P06753 SNORA48.8-201ENST00000391324 134 ntBASIC4.01□□□□□ -1.77
TPM3P06753 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.01□□□□□ -1.77
TPM3P06753 AC126124.2-201ENST00000413542 321 ntBASIC4.01□□□□□ -1.77
TPM3P06753 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.01□□□□□ -1.77
TPM3P06753 AL356095.1-201ENST00000417217 199 ntBASIC4.01□□□□□ -1.77
TPM3P06753 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.01□□□□□ -1.77
TPM3P06753 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TPM3P06753 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.01□□□□□ -1.77
TPM3P06753 AP000907.1-201ENST00000428428 510 ntBASIC4.01□□□□□ -1.77
TPM3P06753 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.01□□□□□ -1.77
TPM3P06753 MTCYBP29-201ENST00000436327 1006 ntBASIC4.01□□□□□ -1.77
TPM3P06753 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.01□□□□□ -1.77
TPM3P06753 HMGN2P21-201ENST00000447764 270 ntBASIC4.01□□□□□ -1.77
TPM3P06753 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.01□□□□□ -1.77
TPM3P06753 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
TPM3P06753 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.01□□□□□ -1.77
TPM3P06753 SNORA64.4-201ENST00000516632 81 ntBASIC4.01□□□□□ -1.77
TPM3P06753 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.01□□□□□ -1.77
TPM3P06753 AC068657.1-201ENST00000520807 306 ntBASIC4.01□□□□□ -1.77
TPM3P06753 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.01□□□□□ -1.77
TPM3P06753 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.01□□□□□ -1.77
TPM3P06753 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.01□□□□□ -1.77
TPM3P06753 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.01□□□□□ -1.77
TPM3P06753 AC037471.2-201ENST00000564941 598 ntBASIC4.01□□□□□ -1.77
TPM3P06753 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.01□□□□□ -1.77
TPM3P06753 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TPM3P06753 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TPM3P06753 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
TPM3P06753 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.01□□□□□ -1.77
TPM3P06753 AC096656.1-201ENST00000623826 1364 ntBASIC4.01□□□□□ -1.77
TPM3P06753 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC4.01□□□□□ -1.77
TPM3P06753 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC4□□□□□ -1.77
TPM3P06753 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
TPM3P06753 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4□□□□□ -1.77
TPM3P06753 SNORA31-201ENST00000362607 130 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 344.1 ms