Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC009464.1-201ENST00000615731 469 ntBASIC4.11□□□□□ -1.75
COL1A1P02452 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.11□□□□□ -1.75
COL1A1P02452 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL1A1P02452 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.1□□□□□ -1.75
COL1A1P02452 AC005332.5-201ENST00000591222 2919 ntBASIC4.1□□□□□ -1.75
COL1A1P02452 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL1A1P02452 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL1A1P02452 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL1A1P02452 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.1□□□□□ -1.75
COL1A1P02452 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
COL1A1P02452 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL1A1P02452 OR10J6P-201ENST00000289731 930 ntBASIC4.1□□□□□ -1.75
COL1A1P02452 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
COL1A1P02452 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.1□□□□□ -1.75
COL1A1P02452 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.1□□□□□ -1.75
COL1A1P02452 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.1□□□□□ -1.75
COL1A1P02452 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.1□□□□□ -1.75
COL1A1P02452 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.1□□□□□ -1.75
COL1A1P02452 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.1□□□□□ -1.75
COL1A1P02452 AC005229.2-201ENST00000456995 399 ntBASIC4.1□□□□□ -1.75
COL1A1P02452 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC4.1□□□□□ -1.75
COL1A1P02452 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.1□□□□□ -1.75
COL1A1P02452 FCF1P3-201ENST00000496394 590 ntBASIC4.1□□□□□ -1.75
COL1A1P02452 HMGB1P21-201ENST00000502313 581 ntBASIC4.1□□□□□ -1.75
COL1A1P02452 AC112198.1-201ENST00000505369 1220 ntBASIC4.1□□□□□ -1.75
COL1A1P02452 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.1□□□□□ -1.75
COL1A1P02452 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.1□□□□□ -1.75
COL1A1P02452 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
COL1A1P02452 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.1□□□□□ -1.75
COL1A1P02452 AC006557.5-201ENST00000603126 811 ntBASIC4.1□□□□□ -1.75
COL1A1P02452 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.1□□□□□ -1.75
COL1A1P02452 RMST_9.1-201ENST00000619945 193 ntBASIC4.1□□□□□ -1.75
COL1A1P02452 AC244205.2-202ENST00000635781 342 ntBASIC4.1□□□□□ -1.75
COL1A1P02452 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
COL1A1P02452 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.1□□□□□ -1.75
COL1A1P02452 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
COL1A1P02452 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.09□□□□□ -1.75
COL1A1P02452 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.09□□□□□ -1.75
COL1A1P02452 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.09□□□□□ -1.75
COL1A1P02452 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
COL1A1P02452 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
COL1A1P02452 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
COL1A1P02452 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
COL1A1P02452 RNA5SP229-201ENST00000410809 99 ntBASIC4.09□□□□□ -1.75
COL1A1P02452 LIPT1P1-201ENST00000415870 1186 ntBASIC4.09□□□□□ -1.75
COL1A1P02452 AC006989.1-201ENST00000427212 131 ntBASIC4.09□□□□□ -1.75
COL1A1P02452 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
COL1A1P02452 AC109925.1-201ENST00000478069 331 ntBASIC4.09□□□□□ -1.75
COL1A1P02452 AC021678.1-201ENST00000505195 936 ntBASIC4.09□□□□□ -1.75
COL1A1P02452 PTGES3P3-201ENST00000511479 482 ntBASIC4.09□□□□□ -1.75
COL1A1P02452 Vault.1-201ENST00000516474 102 ntBASIC4.09□□□□□ -1.75
COL1A1P02452 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
COL1A1P02452 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.09□□□□□ -1.75
COL1A1P02452 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.09□□□□□ -1.75
COL1A1P02452 AC026422.1-201ENST00000623961 452 ntBASIC4.09□□□□□ -1.75
COL1A1P02452 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.09□□□□□ -1.76
COL1A1P02452 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
COL1A1P02452 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
COL1A1P02452 GSTA8P-201ENST00000404253 637 ntBASIC4.08□□□□□ -1.76
COL1A1P02452 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
COL1A1P02452 FTLP19-201ENST00000433300 394 ntBASIC4.08□□□□□ -1.76
COL1A1P02452 MRPS18BP2-201ENST00000434310 759 ntBASIC4.08□□□□□ -1.76
COL1A1P02452 AL831737.1-201ENST00000441288 271 ntBASIC4.08□□□□□ -1.76
COL1A1P02452 NANOGNBP1-201ENST00000448444 480 ntBASIC4.08□□□□□ -1.76
COL1A1P02452 AC006445.1-201ENST00000491925 405 ntBASIC4.08□□□□□ -1.76
COL1A1P02452 AC020893.1-201ENST00000502452 580 ntBASIC4.08□□□□□ -1.76
COL1A1P02452 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.08□□□□□ -1.76
COL1A1P02452 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.08□□□□□ -1.76
COL1A1P02452 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.08□□□□□ -1.76
COL1A1P02452 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.08□□□□□ -1.76
COL1A1P02452 NARSP2-201ENST00000518524 679 ntBASIC4.08□□□□□ -1.76
COL1A1P02452 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.08□□□□□ -1.76
COL1A1P02452 AC004024.1-201ENST00000549244 247 ntBASIC4.08□□□□□ -1.76
COL1A1P02452 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.08□□□□□ -1.76
COL1A1P02452 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.08□□□□□ -1.76
COL1A1P02452 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.08□□□□□ -1.76
COL1A1P02452 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.08□□□□□ -1.76
COL1A1P02452 AL450472.3-201ENST00000615578 367 ntBASIC4.08□□□□□ -1.76
COL1A1P02452 AL158196.1-201ENST00000616786 434 ntBASIC4.08□□□□□ -1.76
COL1A1P02452 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
COL1A1P02452 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
COL1A1P02452 FAM35BP-202ENST00000497389 3337 ntBASIC4.08□□□□□ -1.76
COL1A1P02452 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.07□□□□□ -1.76
COL1A1P02452 AC000123.3-201ENST00000624029 4975 ntBASIC4.07□□□□□ -1.76
COL1A1P02452 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
COL1A1P02452 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
COL1A1P02452 AC027287.1-201ENST00000553115 1453 ntBASIC4.07□□□□□ -1.76
COL1A1P02452 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.07□□□□□ -1.76
COL1A1P02452 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL1A1P02452 RNA5SP235-201ENST00000365411 114 ntBASIC4.07□□□□□ -1.76
COL1A1P02452 AL391417.1-201ENST00000404100 426 ntBASIC4.07□□□□□ -1.76
COL1A1P02452 RPL7P28-201ENST00000437739 740 ntBASIC4.07□□□□□ -1.76
COL1A1P02452 AC006028.1-201ENST00000438379 402 ntBASIC4.07□□□□□ -1.76
COL1A1P02452 ATP5C1P1-201ENST00000441945 895 ntBASIC4.07□□□□□ -1.76
COL1A1P02452 AC010307.1-201ENST00000467206 836 ntBASIC4.07□□□□□ -1.76
COL1A1P02452 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
COL1A1P02452 OR4R3P-201ENST00000525084 838 ntBASIC4.07□□□□□ -1.76
COL1A1P02452 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.07□□□□□ -1.76
COL1A1P02452 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
COL1A1P02452 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms