Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 RBMY2KP-201ENST00000418221 992 ntBASIC2.94□□□□□ -1.94
HLA-DQA1P01909 AL139095.3-201ENST00000419672 1203 ntBASIC2.94□□□□□ -1.94
HLA-DQA1P01909 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
HLA-DQA1P01909 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC2.94□□□□□ -1.94
HLA-DQA1P01909 AC009480.2-201ENST00000422916 432 ntBASIC2.94□□□□□ -1.94
HLA-DQA1P01909 AC073310.1-201ENST00000423226 1033 ntBASIC2.94□□□□□ -1.94
HLA-DQA1P01909 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC2.94□□□□□ -1.94
HLA-DQA1P01909 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.94□□□□□ -1.94
HLA-DQA1P01909 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC2.94□□□□□ -1.94
HLA-DQA1P01909 AL138878.2-201ENST00000440581 1241 ntBASIC2.94□□□□□ -1.94
HLA-DQA1P01909 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC2.94□□□□□ -1.94
HLA-DQA1P01909 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
HLA-DQA1P01909 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.94□□□□□ -1.94
HLA-DQA1P01909 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC2.94□□□□□ -1.94
HLA-DQA1P01909 MRPL35P4-201ENST00000453682 566 ntBASIC2.94□□□□□ -1.94
HLA-DQA1P01909 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
HLA-DQA1P01909 AC087385.1-201ENST00000475062 312 ntBASIC2.94□□□□□ -1.94
HLA-DQA1P01909 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
HLA-DQA1P01909 AC007688.1-201ENST00000475592 759 ntBASIC2.94□□□□□ -1.94
HLA-DQA1P01909 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC2.94□□□□□ -1.94
HLA-DQA1P01909 AC073522.1-201ENST00000483312 377 ntBASIC2.94□□□□□ -1.94
HLA-DQA1P01909 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC2.94□□□□□ -1.94
HLA-DQA1P01909 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.94□□□□□ -1.94
HLA-DQA1P01909 AC231760.1-201ENST00000498002 260 ntBASIC2.94□□□□□ -1.94
HLA-DQA1P01909 KRTAP5-14P-201ENST00000502328 121 ntBASIC2.94□□□□□ -1.94
HLA-DQA1P01909 AC098799.1-201ENST00000504752 800 ntBASIC2.94□□□□□ -1.94
HLA-DQA1P01909 AC090071.1-201ENST00000507713 644 ntBASIC2.94□□□□□ -1.94
HLA-DQA1P01909 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC2.94□□□□□ -1.94
HLA-DQA1P01909 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC2.94□□□□□ -1.94
HLA-DQA1P01909 AC110792.2-201ENST00000510278 224 ntBASIC2.94□□□□□ -1.94
HLA-DQA1P01909 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC2.94□□□□□ -1.94
HLA-DQA1P01909 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.94□□□□□ -1.94
HLA-DQA1P01909 AC022790.1-201ENST00000522872 204 ntBASIC2.94□□□□□ -1.94
HLA-DQA1P01909 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
HLA-DQA1P01909 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC2.94□□□□□ -1.94
HLA-DQA1P01909 CR383656.6-201ENST00000550518 394 ntBASIC2.94□□□□□ -1.94
HLA-DQA1P01909 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC2.94□□□□□ -1.94
HLA-DQA1P01909 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC2.94□□□□□ -1.94
HLA-DQA1P01909 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
HLA-DQA1P01909 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC2.94□□□□□ -1.94
HLA-DQA1P01909 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.94□□□□□ -1.94
HLA-DQA1P01909 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC2.94□□□□□ -1.94
HLA-DQA1P01909 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC2.94□□□□□ -1.94
HLA-DQA1P01909 AC114878.2-201ENST00000604863 1251 ntBASIC2.94□□□□□ -1.94
HLA-DQA1P01909 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC2.94□□□□□ -1.94
HLA-DQA1P01909 AC012409.3-201ENST00000611343 981 ntBASIC2.94□□□□□ -1.94
HLA-DQA1P01909 STMN1P1-201ENST00000617809 440 ntBASIC2.94□□□□□ -1.94
HLA-DQA1P01909 AC243756.2-201ENST00000618406 463 ntBASIC2.94□□□□□ -1.94
HLA-DQA1P01909 AC073569.3-201ENST00000619055 682 ntBASIC2.94□□□□□ -1.94
HLA-DQA1P01909 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC2.94□□□□□ -1.94
HLA-DQA1P01909 CDRT1-208ENST00000630868 794 ntBASIC2.94□□□□□ -1.94
HLA-DQA1P01909 AL590396.2-201ENST00000636511 1041 ntBASIC2.94□□□□□ -1.94
HLA-DQA1P01909 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC2.94□□□□□ -1.94
HLA-DQA1P01909 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.94□□□□□ -1.94
HLA-DQA1P01909 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HLA-DQA1P01909 MFSD8-220ENST00000641243 1422 ntBASIC2.93□□□□□ -1.94
HLA-DQA1P01909 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HLA-DQA1P01909 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
HLA-DQA1P01909 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
HLA-DQA1P01909 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
HLA-DQA1P01909 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.93□□□□□ -1.94
HLA-DQA1P01909 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
HLA-DQA1P01909 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.93□□□□□ -1.94
HLA-DQA1P01909 AC066616.2-201ENST00000559334 1481 ntBASIC2.93□□□□□ -1.94
HLA-DQA1P01909 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
HLA-DQA1P01909 AL512283.1-201ENST00000606756 1384 ntBASIC2.93□□□□□ -1.94
HLA-DQA1P01909 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
HLA-DQA1P01909 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
HLA-DQA1P01909 OR5P1P-201ENST00000299512 925 ntBASIC2.93□□□□□ -1.94
HLA-DQA1P01909 AC079741.1-201ENST00000321498 212 ntBASIC2.93□□□□□ -1.94
HLA-DQA1P01909 SNORA60-201ENST00000362396 134 ntBASIC2.93□□□□□ -1.94
HLA-DQA1P01909 RNU1-130P-201ENST00000363930 160 ntBASIC2.93□□□□□ -1.94
HLA-DQA1P01909 RPS26P8-201ENST00000393490 348 ntBASIC2.93□□□□□ -1.94
HLA-DQA1P01909 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
HLA-DQA1P01909 RPS4XP9-201ENST00000405151 780 ntBASIC2.93□□□□□ -1.94
HLA-DQA1P01909 AC092745.2-202ENST00000411880 369 ntBASIC2.93□□□□□ -1.94
HLA-DQA1P01909 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.93□□□□□ -1.94
HLA-DQA1P01909 RPEP3-201ENST00000425462 676 ntBASIC2.93□□□□□ -1.94
HLA-DQA1P01909 DNAJC19P7-201ENST00000428811 344 ntBASIC2.93□□□□□ -1.94
HLA-DQA1P01909 MOB1AP1-201ENST00000430903 535 ntBASIC2.93□□□□□ -1.94
HLA-DQA1P01909 RPL37P1-201ENST00000432310 284 ntBASIC2.93□□□□□ -1.94
HLA-DQA1P01909 RPS26P30-201ENST00000443431 335 ntBASIC2.93□□□□□ -1.94
HLA-DQA1P01909 AL035407.2-201ENST00000454090 378 ntBASIC2.93□□□□□ -1.94
HLA-DQA1P01909 RPL6P9-201ENST00000466502 859 ntBASIC2.93□□□□□ -1.94
HLA-DQA1P01909 AC109327.1-201ENST00000471666 403 ntBASIC2.93□□□□□ -1.94
HLA-DQA1P01909 AC104689.1-201ENST00000473356 768 ntBASIC2.93□□□□□ -1.94
HLA-DQA1P01909 TRBV12-2-201ENST00000489763 344 ntBASIC2.93□□□□□ -1.94
HLA-DQA1P01909 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC2.93□□□□□ -1.94
HLA-DQA1P01909 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC2.93□□□□□ -1.94
HLA-DQA1P01909 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC2.93□□□□□ -1.94
HLA-DQA1P01909 AC027338.1-201ENST00000514840 825 ntBASIC2.93□□□□□ -1.94
HLA-DQA1P01909 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HLA-DQA1P01909 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC2.93□□□□□ -1.94
HLA-DQA1P01909 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC2.93□□□□□ -1.94
HLA-DQA1P01909 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC2.93□□□□□ -1.94
HLA-DQA1P01909 AC090877.1-201ENST00000561418 344 ntBASIC2.93□□□□□ -1.94
HLA-DQA1P01909 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC2.93□□□□□ -1.94
HLA-DQA1P01909 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC2.93□□□□□ -1.94
HLA-DQA1P01909 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC2.93□□□□□ -1.94
HLA-DQA1P01909 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms