Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 AC092653.1-201ENST00000608509 531 ntBASIC3.62□□□□□ -1.83
SEMA3DO95025 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.62□□□□□ -1.83
SEMA3DO95025 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.62□□□□□ -1.83
SEMA3DO95025 MIR4278-201ENST00000636094 69 ntBASIC3.62□□□□□ -1.83
SEMA3DO95025 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SEMA3DO95025 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.62□□□□□ -1.83
SEMA3DO95025 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SEMA3DO95025 AC006504.1-201ENST00000562493 3666 ntBASIC3.61□□□□□ -1.83
SEMA3DO95025 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.61□□□□□ -1.83
SEMA3DO95025 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.61□□□□□ -1.83
SEMA3DO95025 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.61□□□□□ -1.83
SEMA3DO95025 ATP5F1P4-201ENST00000397288 746 ntBASIC3.61□□□□□ -1.83
SEMA3DO95025 SNORA3.3-201ENST00000408712 125 ntBASIC3.61□□□□□ -1.83
SEMA3DO95025 RPL21P109-201ENST00000422213 475 ntBASIC3.61□□□□□ -1.83
SEMA3DO95025 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.61□□□□□ -1.83
SEMA3DO95025 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.61□□□□□ -1.83
SEMA3DO95025 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.61□□□□□ -1.83
SEMA3DO95025 SNORA71B-202ENST00000439232 272 ntBASIC3.61□□□□□ -1.83
SEMA3DO95025 TXNP1-201ENST00000441872 371 ntBASIC3.61□□□□□ -1.83
SEMA3DO95025 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.61□□□□□ -1.83
SEMA3DO95025 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.61□□□□□ -1.83
SEMA3DO95025 MTCO3P20-201ENST00000454926 688 ntBASIC3.61□□□□□ -1.83
SEMA3DO95025 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.61□□□□□ -1.83
SEMA3DO95025 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.61□□□□□ -1.83
SEMA3DO95025 FABP5P6-201ENST00000510588 409 ntBASIC3.61□□□□□ -1.83
SEMA3DO95025 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.61□□□□□ -1.83
SEMA3DO95025 ACTR6P1-201ENST00000514311 1104 ntBASIC3.61□□□□□ -1.83
SEMA3DO95025 RNA5SP208-201ENST00000516156 78 ntBASIC3.61□□□□□ -1.83
SEMA3DO95025 RN7SKP82-201ENST00000516786 223 ntBASIC3.61□□□□□ -1.83
SEMA3DO95025 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.61□□□□□ -1.83
SEMA3DO95025 AC022784.5-201ENST00000522241 437 ntBASIC3.61□□□□□ -1.83
SEMA3DO95025 HIGD1AP10-201ENST00000527837 282 ntBASIC3.61□□□□□ -1.83
SEMA3DO95025 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.61□□□□□ -1.83
SEMA3DO95025 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.61□□□□□ -1.83
SEMA3DO95025 AC007224.1-201ENST00000564410 144 ntBASIC3.61□□□□□ -1.83
SEMA3DO95025 AGGF1P6-201ENST00000569213 976 ntBASIC3.61□□□□□ -1.83
SEMA3DO95025 AC099489.2-201ENST00000574976 260 ntBASIC3.61□□□□□ -1.83
SEMA3DO95025 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.61□□□□□ -1.83
SEMA3DO95025 AC053481.4-201ENST00000583164 216 ntBASIC3.61□□□□□ -1.83
SEMA3DO95025 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.61□□□□□ -1.83
SEMA3DO95025 AC006254.3-201ENST00000603353 884 ntBASIC3.61□□□□□ -1.83
SEMA3DO95025 BRDTP1-201ENST00000605735 677 ntBASIC3.61□□□□□ -1.83
SEMA3DO95025 AC008121.2-201ENST00000614647 523 ntBASIC3.61□□□□□ -1.83
SEMA3DO95025 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SEMA3DO95025 XIST_intron.1-201ENST00000619444 68 ntBASIC3.61□□□□□ -1.83
SEMA3DO95025 AP003072.4-201ENST00000624580 310 ntBASIC3.61□□□□□ -1.83
SEMA3DO95025 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
SEMA3DO95025 AC119674.1-220ENST00000641502 1048 ntBASIC3.61□□□□□ -1.83
SEMA3DO95025 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SEMA3DO95025 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SEMA3DO95025 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.61□□□□□ -1.83
SEMA3DO95025 CR381670.1-201ENST00000624291 1693 ntBASIC3.61□□□□□ -1.83
SEMA3DO95025 AC096656.1-201ENST00000623826 1364 ntBASIC3.61□□□□□ -1.83
SEMA3DO95025 SPATA2P1-201ENST00000431223 2055 ntBASIC3.61□□□□□ -1.83
SEMA3DO95025 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SEMA3DO95025 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.6□□□□□ -1.83
SEMA3DO95025 AC091152.2-201ENST00000591628 2569 ntBASIC3.6□□□□□ -1.83
SEMA3DO95025 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SEMA3DO95025 AC024560.2-201ENST00000507981 1497 ntBASIC3.6□□□□□ -1.83
SEMA3DO95025 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SEMA3DO95025 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
SEMA3DO95025 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SEMA3DO95025 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SEMA3DO95025 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
SEMA3DO95025 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
SEMA3DO95025 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
SEMA3DO95025 RNA5SP283-201ENST00000365604 119 ntBASIC3.6□□□□□ -1.83
SEMA3DO95025 MIR320B1-201ENST00000390209 79 ntBASIC3.6□□□□□ -1.83
SEMA3DO95025 RNA5SP424-201ENST00000390988 115 ntBASIC3.6□□□□□ -1.83
SEMA3DO95025 HSPE1P8-201ENST00000406997 288 ntBASIC3.6□□□□□ -1.83
SEMA3DO95025 RNU6-628P-201ENST00000410675 107 ntBASIC3.6□□□□□ -1.83
SEMA3DO95025 RAB28P1-201ENST00000411517 641 ntBASIC3.6□□□□□ -1.83
SEMA3DO95025 RPL26P37-201ENST00000411983 438 ntBASIC3.6□□□□□ -1.83
SEMA3DO95025 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.6□□□□□ -1.83
SEMA3DO95025 CYCSP43-201ENST00000438233 310 ntBASIC3.6□□□□□ -1.83
SEMA3DO95025 AL627224.1-201ENST00000448334 444 ntBASIC3.6□□□□□ -1.83
SEMA3DO95025 AC006511.1-201ENST00000470614 315 ntBASIC3.6□□□□□ -1.83
SEMA3DO95025 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.6□□□□□ -1.83
SEMA3DO95025 VN1R105P-201ENST00000486595 910 ntBASIC3.6□□□□□ -1.83
SEMA3DO95025 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.6□□□□□ -1.83
SEMA3DO95025 RN7SL323P-201ENST00000494712 295 ntBASIC3.6□□□□□ -1.83
SEMA3DO95025 RNU6-1308P-201ENST00000516817 103 ntBASIC3.6□□□□□ -1.83
SEMA3DO95025 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.6□□□□□ -1.83
SEMA3DO95025 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.6□□□□□ -1.83
SEMA3DO95025 OR8R1P-201ENST00000543943 764 ntBASIC3.6□□□□□ -1.83
SEMA3DO95025 AC074029.2-201ENST00000551045 634 ntBASIC3.6□□□□□ -1.83
SEMA3DO95025 AC006960.3-201ENST00000561845 705 ntBASIC3.6□□□□□ -1.83
SEMA3DO95025 MIR4286-201ENST00000580651 93 ntBASIC3.6□□□□□ -1.83
SEMA3DO95025 AL391834.1-201ENST00000609609 560 ntBASIC3.6□□□□□ -1.83
SEMA3DO95025 AC139769.3-201ENST00000618383 175 ntBASIC3.6□□□□□ -1.83
SEMA3DO95025 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.6□□□□□ -1.83
SEMA3DO95025 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SEMA3DO95025 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.6□□□□□ -1.83
SEMA3DO95025 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.6□□□□□ -1.83
SEMA3DO95025 AC119674.1-212ENST00000641155 993 ntBASIC3.6□□□□□ -1.83
SEMA3DO95025 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.6□□□□□ -1.83
SEMA3DO95025 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SEMA3DO95025 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SEMA3DO95025 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SEMA3DO95025 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms