Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.38□□□□□ -1.71
GPC4O75487 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
GPC4O75487 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.38□□□□□ -1.71
GPC4O75487 AP005019.3-201ENST00000620418 560 ntBASIC4.38□□□□□ -1.71
GPC4O75487 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.38□□□□□ -1.71
GPC4O75487 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.38□□□□□ -1.71
GPC4O75487 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.38□□□□□ -1.71
GPC4O75487 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
GPC4O75487 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
GPC4O75487 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
GPC4O75487 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
GPC4O75487 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
GPC4O75487 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
GPC4O75487 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
GPC4O75487 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
GPC4O75487 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.37□□□□□ -1.71
GPC4O75487 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.37□□□□□ -1.71
GPC4O75487 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
GPC4O75487 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
GPC4O75487 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
GPC4O75487 RNA5SP307-201ENST00000362863 116 ntBASIC4.37□□□□□ -1.71
GPC4O75487 RNU4-68P-201ENST00000364314 141 ntBASIC4.37□□□□□ -1.71
GPC4O75487 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
GPC4O75487 RPS4XP9-201ENST00000405151 780 ntBASIC4.37□□□□□ -1.71
GPC4O75487 RN7SKP167-201ENST00000411047 285 ntBASIC4.37□□□□□ -1.71
GPC4O75487 AC004552.1-201ENST00000419089 348 ntBASIC4.37□□□□□ -1.71
GPC4O75487 AL513175.2-201ENST00000422071 443 ntBASIC4.37□□□□□ -1.71
GPC4O75487 RPS27AP7-201ENST00000422792 455 ntBASIC4.37□□□□□ -1.71
GPC4O75487 RPF2P1-201ENST00000424137 906 ntBASIC4.37□□□□□ -1.71
GPC4O75487 RPL30P3-201ENST00000424262 333 ntBASIC4.37□□□□□ -1.71
GPC4O75487 Z93242.1-201ENST00000427102 353 ntBASIC4.37□□□□□ -1.71
GPC4O75487 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.37□□□□□ -1.71
GPC4O75487 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.37□□□□□ -1.71
GPC4O75487 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.37□□□□□ -1.71
GPC4O75487 AC079776.3-201ENST00000450665 370 ntBASIC4.37□□□□□ -1.71
GPC4O75487 DDX39BP2-208ENST00000453923 258 ntBASIC4.37□□□□□ -1.71
GPC4O75487 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.37□□□□□ -1.71
GPC4O75487 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.37□□□□□ -1.71
GPC4O75487 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.37□□□□□ -1.71
GPC4O75487 NF1P3-201ENST00000457709 450 ntBASIC4.37□□□□□ -1.71
GPC4O75487 AC005410.1-202ENST00000460347 485 ntBASIC4.37□□□□□ -1.71
GPC4O75487 RPS26P3-201ENST00000470205 348 ntBASIC4.37□□□□□ -1.71
GPC4O75487 RPL23AP44-201ENST00000482216 473 ntBASIC4.37□□□□□ -1.71
GPC4O75487 AC090543.2-201ENST00000483963 348 ntBASIC4.37□□□□□ -1.71
GPC4O75487 AC004057.1-201ENST00000485827 348 ntBASIC4.37□□□□□ -1.71
GPC4O75487 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.37□□□□□ -1.71
GPC4O75487 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.37□□□□□ -1.71
GPC4O75487 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.37□□□□□ -1.71
GPC4O75487 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.37□□□□□ -1.71
GPC4O75487 SNORD116-26-201ENST00000516006 96 ntBASIC4.37□□□□□ -1.71
GPC4O75487 RNU6-885P-201ENST00000516607 104 ntBASIC4.37□□□□□ -1.71
GPC4O75487 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.37□□□□□ -1.71
GPC4O75487 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.37□□□□□ -1.71
GPC4O75487 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.37□□□□□ -1.71
GPC4O75487 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.37□□□□□ -1.71
GPC4O75487 AC084757.1-201ENST00000559987 490 ntBASIC4.37□□□□□ -1.71
GPC4O75487 RPL12P25-202ENST00000598100 674 ntBASIC4.37□□□□□ -1.71
GPC4O75487 AC025946.2-201ENST00000603398 234 ntBASIC4.37□□□□□ -1.71
GPC4O75487 AC020634.1-201ENST00000608701 549 ntBASIC4.37□□□□□ -1.71
GPC4O75487 AC012409.3-201ENST00000611343 981 ntBASIC4.37□□□□□ -1.71
GPC4O75487 AP000346.3-201ENST00000622821 210 ntBASIC4.37□□□□□ -1.71
GPC4O75487 AL157770.1-201ENST00000623049 439 ntBASIC4.37□□□□□ -1.71
GPC4O75487 AC090506.2-201ENST00000624521 419 ntBASIC4.37□□□□□ -1.71
GPC4O75487 AC006065.6-201ENST00000625201 545 ntBASIC4.37□□□□□ -1.71
GPC4O75487 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.37□□□□□ -1.71
GPC4O75487 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.37□□□□□ -1.71
GPC4O75487 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.37□□□□□ -1.71
GPC4O75487 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
GPC4O75487 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
GPC4O75487 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.36□□□□□ -1.71
GPC4O75487 AC010300.1-201ENST00000600671 5134 ntBASIC4.36□□□□□ -1.71
GPC4O75487 AC007390.2-201ENST00000606229 3803 ntBASIC4.36□□□□□ -1.71
GPC4O75487 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.36□□□□□ -1.71
GPC4O75487 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
GPC4O75487 AP005901.5-201ENST00000545779 1796 ntBASIC4.36□□□□□ -1.71
GPC4O75487 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
GPC4O75487 RNU1-130P-201ENST00000363930 160 ntBASIC4.36□□□□□ -1.71
GPC4O75487 MIR3065-201ENST00000390137 79 ntBASIC4.36□□□□□ -1.71
GPC4O75487 RNA5SP104-201ENST00000410989 118 ntBASIC4.36□□□□□ -1.71
GPC4O75487 SNORA74C-2-201ENST00000411179 201 ntBASIC4.36□□□□□ -1.71
GPC4O75487 RPL26P29-201ENST00000415623 438 ntBASIC4.36□□□□□ -1.71
GPC4O75487 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.36□□□□□ -1.71
GPC4O75487 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC4.36□□□□□ -1.71
GPC4O75487 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.36□□□□□ -1.71
GPC4O75487 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.36□□□□□ -1.71
GPC4O75487 AL035246.1-201ENST00000433554 1255 ntBASIC4.36□□□□□ -1.71
GPC4O75487 AC023347.2-201ENST00000433994 462 ntBASIC4.36□□□□□ -1.71
GPC4O75487 PPIAP17-201ENST00000438507 471 ntBASIC4.36□□□□□ -1.71
GPC4O75487 EEF1A1P39-201ENST00000440791 250 ntBASIC4.36□□□□□ -1.71
GPC4O75487 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
GPC4O75487 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.36□□□□□ -1.71
GPC4O75487 VN1R25P-201ENST00000443385 738 ntBASIC4.36□□□□□ -1.71
GPC4O75487 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.36□□□□□ -1.71
GPC4O75487 OFD1P3Y-201ENST00000453312 783 ntBASIC4.36□□□□□ -1.71
GPC4O75487 PRELID3BP7-201ENST00000503606 469 ntBASIC4.36□□□□□ -1.71
GPC4O75487 AC090071.1-201ENST00000507713 644 ntBASIC4.36□□□□□ -1.71
GPC4O75487 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.36□□□□□ -1.71
GPC4O75487 AC006499.6-201ENST00000511169 607 ntBASIC4.36□□□□□ -1.71
GPC4O75487 RNA5SP154-201ENST00000516193 111 ntBASIC4.36□□□□□ -1.71
GPC4O75487 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms