Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 MTND5P27-201ENST00000428871 1720 ntBASIC3.71□□□□□ -1.82
SHOX2O60902 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SHOX2O60902 MIR634-201ENST00000385208 97 ntBASIC3.71□□□□□ -1.82
SHOX2O60902 MIR670-201ENST00000390142 98 ntBASIC3.71□□□□□ -1.82
SHOX2O60902 MIR320B1-201ENST00000390209 79 ntBASIC3.71□□□□□ -1.82
SHOX2O60902 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
SHOX2O60902 MTHFD2P2-201ENST00000407725 247 ntBASIC3.71□□□□□ -1.82
SHOX2O60902 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.71□□□□□ -1.82
SHOX2O60902 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.71□□□□□ -1.82
SHOX2O60902 RNA5SP107-201ENST00000411358 122 ntBASIC3.71□□□□□ -1.82
SHOX2O60902 AC093578.1-201ENST00000415219 368 ntBASIC3.71□□□□□ -1.82
SHOX2O60902 Z74696.2-201ENST00000436514 498 ntBASIC3.71□□□□□ -1.82
SHOX2O60902 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.71□□□□□ -1.82
SHOX2O60902 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.71□□□□□ -1.82
SHOX2O60902 Z95152.1-201ENST00000453556 656 ntBASIC3.71□□□□□ -1.82
SHOX2O60902 AP002884.2-201ENST00000471647 395 ntBASIC3.71□□□□□ -1.82
SHOX2O60902 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.71□□□□□ -1.82
SHOX2O60902 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SHOX2O60902 BLNK-209ENST00000495266 440 ntTSL 5 BASIC3.71□□□□□ -1.82
SHOX2O60902 AC117525.1-201ENST00000515228 503 ntBASIC3.71□□□□□ -1.82
SHOX2O60902 SNORA67.7-201ENST00000516664 135 ntBASIC3.71□□□□□ -1.82
SHOX2O60902 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.71□□□□□ -1.82
SHOX2O60902 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.71□□□□□ -1.82
SHOX2O60902 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.71□□□□□ -1.82
SHOX2O60902 MIR3138-201ENST00000585238 82 ntBASIC3.71□□□□□ -1.82
SHOX2O60902 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.71□□□□□ -1.82
SHOX2O60902 ABI1P1-201ENST00000603375 1120 ntBASIC3.71□□□□□ -1.82
SHOX2O60902 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.71□□□□□ -1.82
SHOX2O60902 SNORA62.6-201ENST00000606322 83 ntBASIC3.71□□□□□ -1.82
SHOX2O60902 AL096803.3-201ENST00000609032 532 ntBASIC3.71□□□□□ -1.82
SHOX2O60902 NF1P10-201ENST00000613227 742 ntBASIC3.71□□□□□ -1.82
SHOX2O60902 AC006133.1-201ENST00000617106 264 ntBASIC3.71□□□□□ -1.82
SHOX2O60902 AC011944.2-201ENST00000624440 683 ntBASIC3.71□□□□□ -1.82
SHOX2O60902 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
SHOX2O60902 AP002001.2-201ENST00000529025 1469 ntBASIC3.71□□□□□ -1.82
SHOX2O60902 SAGE2P-201ENST00000420011 2126 ntBASIC3.71□□□□□ -1.82
SHOX2O60902 AC017002.4-201ENST00000604721 1525 ntBASIC3.7□□□□□ -1.82
SHOX2O60902 AC032011.1-201ENST00000611703 1549 ntBASIC3.7□□□□□ -1.82
SHOX2O60902 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.7□□□□□ -1.82
SHOX2O60902 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SHOX2O60902 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SHOX2O60902 SNORD46.1-201ENST00000364139 104 ntBASIC3.7□□□□□ -1.82
SHOX2O60902 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.7□□□□□ -1.82
SHOX2O60902 RNU11-4P-201ENST00000391149 133 ntBASIC3.7□□□□□ -1.82
SHOX2O60902 AC069218.2-201ENST00000411665 344 ntBASIC3.7□□□□□ -1.82
SHOX2O60902 ELOCP19-201ENST00000411919 318 ntBASIC3.7□□□□□ -1.82
SHOX2O60902 TPT1P2-201ENST00000413105 503 ntBASIC3.7□□□□□ -1.82
SHOX2O60902 HMGB3P23-201ENST00000414981 585 ntBASIC3.7□□□□□ -1.82
SHOX2O60902 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.7□□□□□ -1.82
SHOX2O60902 AC245291.1-201ENST00000419501 328 ntBASIC3.7□□□□□ -1.82
SHOX2O60902 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.7□□□□□ -1.82
SHOX2O60902 AC009965.2-201ENST00000425328 970 ntBASIC3.7□□□□□ -1.82
SHOX2O60902 MRPL50P1-201ENST00000431951 384 ntBASIC3.7□□□□□ -1.82
SHOX2O60902 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.7□□□□□ -1.82
SHOX2O60902 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.7□□□□□ -1.82
SHOX2O60902 AC073143.1-201ENST00000436316 395 ntBASIC3.7□□□□□ -1.82
SHOX2O60902 USP9YP7-201ENST00000436723 430 ntBASIC3.7□□□□□ -1.82
SHOX2O60902 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SHOX2O60902 USP9YP32-201ENST00000452432 430 ntBASIC3.7□□□□□ -1.82
SHOX2O60902 PRSS3P4-201ENST00000453323 162 ntBASIC3.7□□□□□ -1.82
SHOX2O60902 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.7□□□□□ -1.82
SHOX2O60902 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.7□□□□□ -1.82
SHOX2O60902 AC010683.1-201ENST00000473673 378 ntBASIC3.7□□□□□ -1.82
SHOX2O60902 NDUFA5P2-201ENST00000519723 344 ntBASIC3.7□□□□□ -1.82
SHOX2O60902 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.7□□□□□ -1.82
SHOX2O60902 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.7□□□□□ -1.82
SHOX2O60902 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.7□□□□□ -1.82
SHOX2O60902 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.7□□□□□ -1.82
SHOX2O60902 PSMB7P1-201ENST00000556349 514 ntBASIC3.7□□□□□ -1.82
SHOX2O60902 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.7□□□□□ -1.82
SHOX2O60902 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.7□□□□□ -1.82
SHOX2O60902 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.7□□□□□ -1.82
SHOX2O60902 AC091167.4-201ENST00000605079 184 ntBASIC3.7□□□□□ -1.82
SHOX2O60902 AL450472.3-201ENST00000615578 367 ntBASIC3.7□□□□□ -1.82
SHOX2O60902 AC123768.4-201ENST00000616244 701 ntBASIC3.7□□□□□ -1.82
SHOX2O60902 RPL23AP61-201ENST00000623642 466 ntBASIC3.7□□□□□ -1.82
SHOX2O60902 AC073530.2-201ENST00000623987 261 ntBASIC3.7□□□□□ -1.82
SHOX2O60902 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.7□□□□□ -1.82
SHOX2O60902 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.7□□□□□ -1.82
SHOX2O60902 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SHOX2O60902 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SHOX2O60902 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SHOX2O60902 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.7□□□□□ -1.82
SHOX2O60902 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SHOX2O60902 AL592494.2-201ENST00000425455 1548 ntBASIC3.7□□□□□ -1.82
SHOX2O60902 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.69□□□□□ -1.82
SHOX2O60902 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
SHOX2O60902 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.69□□□□□ -1.82
SHOX2O60902 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SHOX2O60902 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.69□□□□□ -1.82
SHOX2O60902 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.69□□□□□ -1.82
SHOX2O60902 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SHOX2O60902 MIR148B-201ENST00000362252 99 ntBASIC3.69□□□□□ -1.82
SHOX2O60902 RNU4-39P-201ENST00000362455 127 ntBASIC3.69□□□□□ -1.82
SHOX2O60902 Y_RNA.111-201ENST00000363248 100 ntBASIC3.69□□□□□ -1.82
SHOX2O60902 RNA5SP509-201ENST00000364577 119 ntBASIC3.69□□□□□ -1.82
SHOX2O60902 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SHOX2O60902 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SHOX2O60902 AC240504.1-201ENST00000395709 845 ntBASIC3.69□□□□□ -1.82
SHOX2O60902 ATP5F1P3-201ENST00000397213 657 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms