Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AF001550.2-201ENST00000636643 217 ntBASIC4.13□□□□□ -1.75
SSX4O60224 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SSX4O60224 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SSX4O60224 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
SSX4O60224 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SSX4O60224 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SSX4O60224 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.13□□□□□ -1.75
SSX4O60224 SAGE2P-201ENST00000420011 2126 ntBASIC4.13□□□□□ -1.75
SSX4O60224 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
SSX4O60224 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.13□□□□□ -1.75
SSX4O60224 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SSX4O60224 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SSX4O60224 MFSD8-216ENST00000641147 4009 ntBASIC4.12□□□□□ -1.75
SSX4O60224 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SSX4O60224 NCLP2-201ENST00000416078 1462 ntBASIC4.12□□□□□ -1.75
SSX4O60224 Z99496.1-201ENST00000469424 1477 ntBASIC4.12□□□□□ -1.75
SSX4O60224 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
SSX4O60224 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SSX4O60224 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SSX4O60224 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
SSX4O60224 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SSX4O60224 DBF4P1-201ENST00000412976 1892 ntBASIC4.12□□□□□ -1.75
SSX4O60224 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SSX4O60224 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
SSX4O60224 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.12□□□□□ -1.75
SSX4O60224 RNA5SP151-201ENST00000365632 117 ntBASIC4.12□□□□□ -1.75
SSX4O60224 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SSX4O60224 AL161909.1-201ENST00000397390 712 ntBASIC4.12□□□□□ -1.75
SSX4O60224 MTCO3P31-201ENST00000405526 789 ntBASIC4.12□□□□□ -1.75
SSX4O60224 VN1R8P-201ENST00000407739 893 ntBASIC4.12□□□□□ -1.75
SSX4O60224 RNU2-21P-201ENST00000410368 188 ntBASIC4.12□□□□□ -1.75
SSX4O60224 VDAC1P9-201ENST00000412766 841 ntBASIC4.12□□□□□ -1.75
SSX4O60224 AC114755.2-201ENST00000413520 361 ntBASIC4.12□□□□□ -1.75
SSX4O60224 LINC00993-201ENST00000420453 540 ntBASIC4.12□□□□□ -1.75
SSX4O60224 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
SSX4O60224 GTF2IP23-201ENST00000423746 351 ntBASIC4.12□□□□□ -1.75
SSX4O60224 HMGB3P5-201ENST00000428894 612 ntBASIC4.12□□□□□ -1.75
SSX4O60224 SKP1P3-201ENST00000429280 487 ntBASIC4.12□□□□□ -1.75
SSX4O60224 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.12□□□□□ -1.75
SSX4O60224 AC084290.1-201ENST00000434995 374 ntBASIC4.12□□□□□ -1.75
SSX4O60224 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.12□□□□□ -1.75
SSX4O60224 AC007327.1-201ENST00000447461 264 ntBASIC4.12□□□□□ -1.75
SSX4O60224 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.12□□□□□ -1.75
SSX4O60224 NDUFA5P7-201ENST00000452914 242 ntBASIC4.12□□□□□ -1.75
SSX4O60224 snoU13.7-201ENST00000459220 104 ntBASIC4.12□□□□□ -1.75
SSX4O60224 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.12□□□□□ -1.75
SSX4O60224 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.12□□□□□ -1.75
SSX4O60224 AC114322.1-201ENST00000506771 926 ntBASIC4.12□□□□□ -1.75
SSX4O60224 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.12□□□□□ -1.75
SSX4O60224 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.12□□□□□ -1.75
SSX4O60224 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.12□□□□□ -1.75
SSX4O60224 AC022790.1-201ENST00000522872 204 ntBASIC4.12□□□□□ -1.75
SSX4O60224 DEFB109D-201ENST00000529497 240 ntBASIC4.12□□□□□ -1.75
SSX4O60224 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.12□□□□□ -1.75
SSX4O60224 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.12□□□□□ -1.75
SSX4O60224 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.12□□□□□ -1.75
SSX4O60224 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.12□□□□□ -1.75
SSX4O60224 AADACP1-206ENST00000561502 1193 ntBASIC4.12□□□□□ -1.75
SSX4O60224 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.12□□□□□ -1.75
SSX4O60224 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.12□□□□□ -1.75
SSX4O60224 AP001269.3-201ENST00000588718 329 ntBASIC4.12□□□□□ -1.75
SSX4O60224 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.12□□□□□ -1.75
SSX4O60224 AC234772.3-201ENST00000602277 528 ntBASIC4.12□□□□□ -1.75
SSX4O60224 AC069545.1-201ENST00000605671 358 ntBASIC4.12□□□□□ -1.75
SSX4O60224 AC020634.1-201ENST00000608701 549 ntBASIC4.12□□□□□ -1.75
SSX4O60224 AL049794.2-201ENST00000616301 365 ntBASIC4.12□□□□□ -1.75
SSX4O60224 AL356863.1-201ENST00000623378 1080 ntBASIC4.12□□□□□ -1.75
SSX4O60224 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SSX4O60224 AC067931.1-201ENST00000624190 671 ntBASIC4.12□□□□□ -1.75
SSX4O60224 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SSX4O60224 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SSX4O60224 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
SSX4O60224 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SSX4O60224 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SSX4O60224 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.12□□□□□ -1.75
SSX4O60224 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.12□□□□□ -1.75
SSX4O60224 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SSX4O60224 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SSX4O60224 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SSX4O60224 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
SSX4O60224 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
SSX4O60224 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
SSX4O60224 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
SSX4O60224 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
SSX4O60224 AL049555.1-201ENST00000562834 1933 ntBASIC4.11□□□□□ -1.75
SSX4O60224 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SSX4O60224 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SSX4O60224 AC011266.1-201ENST00000624119 3569 ntBASIC4.11□□□□□ -1.75
SSX4O60224 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.11□□□□□ -1.75
SSX4O60224 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SSX4O60224 AC067945.1-201ENST00000342609 618 ntBASIC4.11□□□□□ -1.75
SSX4O60224 RNU6-115P-201ENST00000364310 107 ntBASIC4.11□□□□□ -1.75
SSX4O60224 SNORD116.1-201ENST00000365628 92 ntBASIC4.11□□□□□ -1.75
SSX4O60224 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SSX4O60224 RNU6-1300P-201ENST00000391046 108 ntBASIC4.11□□□□□ -1.75
SSX4O60224 RNA5SP104-201ENST00000410989 118 ntBASIC4.11□□□□□ -1.75
SSX4O60224 FCF1P2-201ENST00000415284 583 ntBASIC4.11□□□□□ -1.75
SSX4O60224 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.11□□□□□ -1.75
SSX4O60224 AC234779.1-201ENST00000425910 285 ntBASIC4.11□□□□□ -1.75
SSX4O60224 AL359265.2-201ENST00000434367 631 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms