Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC021146.3-201ENST00000511911 260 ntBASIC4.45□□□□□ -1.7
LDB2O43679 AC008837.2-201ENST00000513076 418 ntBASIC4.45□□□□□ -1.7
LDB2O43679 RNA5SP497-201ENST00000516081 97 ntBASIC4.45□□□□□ -1.7
LDB2O43679 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.45□□□□□ -1.7
LDB2O43679 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.45□□□□□ -1.7
LDB2O43679 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.45□□□□□ -1.7
LDB2O43679 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.45□□□□□ -1.7
LDB2O43679 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.45□□□□□ -1.7
LDB2O43679 AC009643.1-201ENST00000532030 391 ntBASIC4.45□□□□□ -1.7
LDB2O43679 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.45□□□□□ -1.7
LDB2O43679 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LDB2O43679 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.45□□□□□ -1.7
LDB2O43679 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.45□□□□□ -1.7
LDB2O43679 RPL23AP97-201ENST00000568955 471 ntBASIC4.45□□□□□ -1.7
LDB2O43679 MIR4284-201ENST00000578924 81 ntBASIC4.45□□□□□ -1.7
LDB2O43679 BPTFP1-201ENST00000579209 492 ntBASIC4.45□□□□□ -1.7
LDB2O43679 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.45□□□□□ -1.7
LDB2O43679 MIR4697-201ENST00000582977 78 ntBASIC4.45□□□□□ -1.7
LDB2O43679 AC008759.1-201ENST00000589783 983 ntBASIC4.45□□□□□ -1.7
LDB2O43679 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.45□□□□□ -1.7
LDB2O43679 AL031281.1-201ENST00000604049 488 ntBASIC4.45□□□□□ -1.7
LDB2O43679 AC090246.1-201ENST00000616499 426 ntBASIC4.45□□□□□ -1.7
LDB2O43679 AC007546.2-201ENST00000623996 360 ntBASIC4.45□□□□□ -1.7
LDB2O43679 AC006065.6-201ENST00000625201 545 ntBASIC4.45□□□□□ -1.7
LDB2O43679 MIR4278-201ENST00000636094 69 ntBASIC4.45□□□□□ -1.7
LDB2O43679 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.45□□□□□ -1.7
LDB2O43679 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.45□□□□□ -1.7
LDB2O43679 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LDB2O43679 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LDB2O43679 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.45□□□□□ -1.7
LDB2O43679 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
LDB2O43679 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.45□□□□□ -1.7
LDB2O43679 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.45□□□□□ -1.7
LDB2O43679 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LDB2O43679 AL049737.1-201ENST00000413920 1403 ntBASIC4.45□□□□□ -1.7
LDB2O43679 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LDB2O43679 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
LDB2O43679 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
LDB2O43679 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
LDB2O43679 OR56B2P-202ENST00000641377 2453 ntBASIC4.45□□□□□ -1.7
LDB2O43679 SGO1P2-201ENST00000429458 1589 ntBASIC4.44□□□□□ -1.7
LDB2O43679 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.44□□□□□ -1.7
LDB2O43679 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.44□□□□□ -1.7
LDB2O43679 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LDB2O43679 RNA5SP22-201ENST00000365393 109 ntBASIC4.44□□□□□ -1.7
LDB2O43679 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
LDB2O43679 RNU6-317P-201ENST00000384031 107 ntBASIC4.44□□□□□ -1.7
LDB2O43679 ATP5F1P3-201ENST00000397213 657 ntBASIC4.44□□□□□ -1.7
LDB2O43679 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.44□□□□□ -1.7
LDB2O43679 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.44□□□□□ -1.7
LDB2O43679 P2RY10P2-201ENST00000416730 913 ntBASIC4.44□□□□□ -1.7
LDB2O43679 AC009302.1-201ENST00000417147 390 ntBASIC4.44□□□□□ -1.7
LDB2O43679 AL139421.1-201ENST00000423010 169 ntBASIC4.44□□□□□ -1.7
LDB2O43679 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.44□□□□□ -1.7
LDB2O43679 DPRXP1-201ENST00000426312 460 ntBASIC4.44□□□□□ -1.7
LDB2O43679 MTCO1P54-201ENST00000430139 712 ntBASIC4.44□□□□□ -1.7
LDB2O43679 VN1R108P-201ENST00000431580 830 ntBASIC4.44□□□□□ -1.7
LDB2O43679 AL445567.1-201ENST00000439121 144 ntBASIC4.44□□□□□ -1.7
LDB2O43679 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.44□□□□□ -1.7
LDB2O43679 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.44□□□□□ -1.7
LDB2O43679 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.44□□□□□ -1.7
LDB2O43679 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.44□□□□□ -1.7
LDB2O43679 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.44□□□□□ -1.7
LDB2O43679 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.44□□□□□ -1.7
LDB2O43679 AC243772.1-201ENST00000451620 410 ntBASIC4.44□□□□□ -1.7
LDB2O43679 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.44□□□□□ -1.7
LDB2O43679 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.44□□□□□ -1.7
LDB2O43679 RPL7AP52-201ENST00000458096 790 ntBASIC4.44□□□□□ -1.7
LDB2O43679 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.44□□□□□ -1.7
LDB2O43679 RN7SL41P-201ENST00000476144 297 ntBASIC4.44□□□□□ -1.7
LDB2O43679 AC012158.1-204ENST00000483430 465 ntBASIC4.44□□□□□ -1.7
LDB2O43679 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.44□□□□□ -1.7
LDB2O43679 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.44□□□□□ -1.7
LDB2O43679 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.44□□□□□ -1.7
LDB2O43679 AC116353.3-201ENST00000511215 249 ntBASIC4.44□□□□□ -1.7
LDB2O43679 AC090819.1-201ENST00000523800 1111 ntBASIC4.44□□□□□ -1.7
LDB2O43679 OR4C2P-201ENST00000530855 1064 ntBASIC4.44□□□□□ -1.7
LDB2O43679 AC107918.3-201ENST00000533272 382 ntBASIC4.44□□□□□ -1.7
LDB2O43679 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.44□□□□□ -1.7
LDB2O43679 ELOCP32-201ENST00000548625 324 ntBASIC4.44□□□□□ -1.7
LDB2O43679 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.44□□□□□ -1.7
LDB2O43679 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC4.44□□□□□ -1.7
LDB2O43679 MTCYBP33-201ENST00000575007 1130 ntBASIC4.44□□□□□ -1.7
LDB2O43679 AP005119.2-201ENST00000579735 1105 ntBASIC4.44□□□□□ -1.7
LDB2O43679 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.44□□□□□ -1.7
LDB2O43679 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.44□□□□□ -1.7
LDB2O43679 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.44□□□□□ -1.7
LDB2O43679 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.44□□□□□ -1.7
LDB2O43679 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LDB2O43679 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.44□□□□□ -1.7
LDB2O43679 AC023158.2-201ENST00000614876 543 ntBASIC4.44□□□□□ -1.7
LDB2O43679 AC121761.2-201ENST00000617300 689 ntBASIC4.44□□□□□ -1.7
LDB2O43679 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.44□□□□□ -1.7
LDB2O43679 AC016717.3-201ENST00000624730 554 ntBASIC4.44□□□□□ -1.7
LDB2O43679 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
LDB2O43679 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LDB2O43679 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LDB2O43679 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LDB2O43679 AC083843.3-201ENST00000623679 2186 ntBASIC4.44□□□□□ -1.7
LDB2O43679 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms