Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.89□□□□□ -1.63
PHGDHO43175 TMX2P1-201ENST00000436507 708 ntBASIC4.89□□□□□ -1.63
PHGDHO43175 RHOT1P3-201ENST00000436571 331 ntBASIC4.89□□□□□ -1.63
PHGDHO43175 AL360221.1-201ENST00000445989 335 ntBASIC4.89□□□□□ -1.63
PHGDHO43175 KNOP1P3-201ENST00000446933 426 ntBASIC4.89□□□□□ -1.63
PHGDHO43175 PTMAP3-201ENST00000447474 330 ntBASIC4.89□□□□□ -1.63
PHGDHO43175 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.89□□□□□ -1.63
PHGDHO43175 RPL36AP33-201ENST00000450395 310 ntBASIC4.89□□□□□ -1.63
PHGDHO43175 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.89□□□□□ -1.63
PHGDHO43175 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.89□□□□□ -1.63
PHGDHO43175 AL389915.2-201ENST00000454576 441 ntBASIC4.89□□□□□ -1.63
PHGDHO43175 AC097484.1-201ENST00000471148 389 ntBASIC4.89□□□□□ -1.63
PHGDHO43175 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.89□□□□□ -1.63
PHGDHO43175 RAP1BP2-201ENST00000478270 544 ntBASIC4.89□□□□□ -1.63
PHGDHO43175 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.89□□□□□ -1.63
PHGDHO43175 AL024509.2-201ENST00000493462 493 ntBASIC4.89□□□□□ -1.63
PHGDHO43175 AC072052.1-201ENST00000496556 306 ntBASIC4.89□□□□□ -1.63
PHGDHO43175 AC114981.1-201ENST00000503897 678 ntBASIC4.89□□□□□ -1.63
PHGDHO43175 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.89□□□□□ -1.63
PHGDHO43175 AC104057.1-201ENST00000515547 497 ntBASIC4.89□□□□□ -1.63
PHGDHO43175 RNA5SP216-201ENST00000516111 123 ntBASIC4.89□□□□□ -1.63
PHGDHO43175 RNU6-150P-201ENST00000516237 95 ntBASIC4.89□□□□□ -1.63
PHGDHO43175 RNA5SP43-201ENST00000516559 110 ntBASIC4.89□□□□□ -1.63
PHGDHO43175 RN7SKP260-201ENST00000516907 149 ntBASIC4.89□□□□□ -1.63
PHGDHO43175 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.89□□□□□ -1.63
PHGDHO43175 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.89□□□□□ -1.63
PHGDHO43175 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.89□□□□□ -1.63
PHGDHO43175 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PHGDHO43175 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PHGDHO43175 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.89□□□□□ -1.63
PHGDHO43175 AL133457.1-201ENST00000564251 987 ntBASIC4.89□□□□□ -1.63
PHGDHO43175 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PHGDHO43175 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.89□□□□□ -1.63
PHGDHO43175 RN7SL802P-201ENST00000577858 299 ntBASIC4.89□□□□□ -1.63
PHGDHO43175 RN7SL753P-201ENST00000581238 290 ntBASIC4.89□□□□□ -1.63
PHGDHO43175 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.89□□□□□ -1.63
PHGDHO43175 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.89□□□□□ -1.63
PHGDHO43175 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.89□□□□□ -1.63
PHGDHO43175 AC106028.5-201ENST00000610332 395 ntBASIC4.89□□□□□ -1.63
PHGDHO43175 MIR6862-1-201ENST00000613016 70 ntBASIC4.89□□□□□ -1.63
PHGDHO43175 AL627230.1-201ENST00000613077 211 ntBASIC4.89□□□□□ -1.63
PHGDHO43175 MIR6862-2-201ENST00000614755 70 ntBASIC4.89□□□□□ -1.63
PHGDHO43175 MIR7844-201ENST00000616161 122 ntBASIC4.89□□□□□ -1.63
PHGDHO43175 AL591926.8-201ENST00000616876 211 ntBASIC4.89□□□□□ -1.63
PHGDHO43175 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.89□□□□□ -1.63
PHGDHO43175 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.89□□□□□ -1.63
PHGDHO43175 AL356596.1-201ENST00000624230 379 ntBASIC4.89□□□□□ -1.63
PHGDHO43175 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
PHGDHO43175 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PHGDHO43175 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
PHGDHO43175 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.89□□□□□ -1.63
PHGDHO43175 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PHGDHO43175 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.89□□□□□ -1.63
PHGDHO43175 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
PHGDHO43175 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
PHGDHO43175 ERCC6-202ENST00000374127 1782 ntBASIC4.88□□□□□ -1.63
PHGDHO43175 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.88□□□□□ -1.63
PHGDHO43175 SCN1A-220ENST00000641603 12506 ntBASIC4.88□□□□□ -1.63
PHGDHO43175 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.88□□□□□ -1.63
PHGDHO43175 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
PHGDHO43175 AC008549.2-201ENST00000333482 706 ntBASIC4.88□□□□□ -1.63
PHGDHO43175 SNORA51.6-201ENST00000384151 125 ntBASIC4.88□□□□□ -1.63
PHGDHO43175 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
PHGDHO43175 EIF5P1-201ENST00000400019 1231 ntBASIC4.88□□□□□ -1.63
PHGDHO43175 AL121972.1-201ENST00000402023 252 ntBASIC4.88□□□□□ -1.63
PHGDHO43175 AL357515.1-201ENST00000402967 542 ntBASIC4.88□□□□□ -1.63
PHGDHO43175 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.88□□□□□ -1.63
PHGDHO43175 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.88□□□□□ -1.63
PHGDHO43175 AC073136.2-201ENST00000417282 849 ntBASIC4.88□□□□□ -1.63
PHGDHO43175 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.88□□□□□ -1.63
PHGDHO43175 DDX39BP1-205ENST00000422507 192 ntBASIC4.88□□□□□ -1.63
PHGDHO43175 RGS17P1-201ENST00000423358 553 ntBASIC4.88□□□□□ -1.63
PHGDHO43175 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.88□□□□□ -1.63
PHGDHO43175 ZYG11AP1-201ENST00000430329 837 ntBASIC4.88□□□□□ -1.63
PHGDHO43175 AC092162.1-201ENST00000432828 434 ntBASIC4.88□□□□□ -1.63
PHGDHO43175 AC010153.1-201ENST00000432862 727 ntBASIC4.88□□□□□ -1.63
PHGDHO43175 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.88□□□□□ -1.63
PHGDHO43175 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.88□□□□□ -1.63
PHGDHO43175 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.88□□□□□ -1.63
PHGDHO43175 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.88□□□□□ -1.63
PHGDHO43175 EEF1E1P1-201ENST00000446998 430 ntBASIC4.88□□□□□ -1.63
PHGDHO43175 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.88□□□□□ -1.63
PHGDHO43175 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.88□□□□□ -1.63
PHGDHO43175 RPS20P21-201ENST00000466859 343 ntBASIC4.88□□□□□ -1.63
PHGDHO43175 AC068724.1-201ENST00000487100 792 ntBASIC4.88□□□□□ -1.63
PHGDHO43175 ARL4AP1-201ENST00000503220 705 ntBASIC4.88□□□□□ -1.63
PHGDHO43175 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.88□□□□□ -1.63
PHGDHO43175 ATP5LP3-201ENST00000514223 304 ntBASIC4.88□□□□□ -1.63
PHGDHO43175 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.88□□□□□ -1.63
PHGDHO43175 AC022790.1-201ENST00000522872 204 ntBASIC4.88□□□□□ -1.63
PHGDHO43175 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.88□□□□□ -1.63
PHGDHO43175 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.88□□□□□ -1.63
PHGDHO43175 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
PHGDHO43175 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
PHGDHO43175 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
PHGDHO43175 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.88□□□□□ -1.63
PHGDHO43175 PSMB7P1-201ENST00000556349 514 ntBASIC4.88□□□□□ -1.63
PHGDHO43175 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.88□□□□□ -1.63
PHGDHO43175 AC104785.1-201ENST00000603220 588 ntBASIC4.88□□□□□ -1.63
PHGDHO43175 AC092354.1-201ENST00000606057 376 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms