Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 DCAF13P3-201ENST00000561147 1334 ntBASIC4.21□□□□□ -1.74
CLDN3O15551 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CLDN3O15551 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CLDN3O15551 UBE3AP2-201ENST00000429033 2259 ntBASIC4.2□□□□□ -1.74
CLDN3O15551 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLDN3O15551 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLDN3O15551 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.2□□□□□ -1.74
CLDN3O15551 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLDN3O15551 MIR124-3-201ENST00000384866 87 ntBASIC4.2□□□□□ -1.74
CLDN3O15551 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CLDN3O15551 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.2□□□□□ -1.74
CLDN3O15551 RN7SKP202-201ENST00000410439 330 ntBASIC4.2□□□□□ -1.74
CLDN3O15551 TATDN1P1-201ENST00000414123 891 ntBASIC4.2□□□□□ -1.74
CLDN3O15551 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.2□□□□□ -1.74
CLDN3O15551 Z74696.2-201ENST00000436514 498 ntBASIC4.2□□□□□ -1.74
CLDN3O15551 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.2□□□□□ -1.74
CLDN3O15551 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.2□□□□□ -1.74
CLDN3O15551 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLDN3O15551 AL359073.1-201ENST00000448036 403 ntBASIC4.2□□□□□ -1.74
CLDN3O15551 RPS20P21-201ENST00000466859 343 ntBASIC4.2□□□□□ -1.74
CLDN3O15551 RPS6P4-201ENST00000494693 758 ntBASIC4.2□□□□□ -1.74
CLDN3O15551 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.2□□□□□ -1.74
CLDN3O15551 RNA5SP164-201ENST00000516533 110 ntBASIC4.2□□□□□ -1.74
CLDN3O15551 AC103833.1-201ENST00000517442 172 ntBASIC4.2□□□□□ -1.74
CLDN3O15551 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLDN3O15551 OR5AK3P-201ENST00000527486 1297 ntBASIC4.2□□□□□ -1.74
CLDN3O15551 AC025918.2-201ENST00000558683 763 ntBASIC4.2□□□□□ -1.74
CLDN3O15551 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.2□□□□□ -1.74
CLDN3O15551 AP001180.3-201ENST00000582221 145 ntBASIC4.2□□□□□ -1.74
CLDN3O15551 AC040174.2-201ENST00000602701 465 ntBASIC4.2□□□□□ -1.74
CLDN3O15551 AL139286.1-201ENST00000604465 483 ntBASIC4.2□□□□□ -1.74
CLDN3O15551 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLDN3O15551 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLDN3O15551 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLDN3O15551 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLDN3O15551 AL356121.2-201ENST00000624715 780 ntBASIC4.2□□□□□ -1.74
CLDN3O15551 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.2□□□□□ -1.74
CLDN3O15551 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLDN3O15551 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.2□□□□□ -1.74
CLDN3O15551 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.2□□□□□ -1.74
CLDN3O15551 AC008725.1-201ENST00000605123 2263 ntBASIC4.2□□□□□ -1.74
CLDN3O15551 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.2□□□□□ -1.74
CLDN3O15551 AC138393.1-206ENST00000540997 1886 ntBASIC4.2□□□□□ -1.74
CLDN3O15551 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLDN3O15551 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.2□□□□□ -1.74
CLDN3O15551 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CLDN3O15551 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CLDN3O15551 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CLDN3O15551 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
CLDN3O15551 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
CLDN3O15551 AP004289.2-201ENST00000444413 1457 ntBASIC4.19□□□□□ -1.74
CLDN3O15551 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.19□□□□□ -1.74
CLDN3O15551 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CLDN3O15551 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLDN3O15551 OR4A15-201ENST00000314706 1035 ntBASIC4.19□□□□□ -1.74
CLDN3O15551 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.19□□□□□ -1.74
CLDN3O15551 GCNT6-201ENST00000379591 934 ntBASIC4.19□□□□□ -1.74
CLDN3O15551 OR52E6-202ENST00000379946 954 ntBASIC4.19□□□□□ -1.74
CLDN3O15551 RPL32P23-201ENST00000397237 405 ntBASIC4.19□□□□□ -1.74
CLDN3O15551 RNU2-6P-201ENST00000411404 190 ntBASIC4.19□□□□□ -1.74
CLDN3O15551 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.19□□□□□ -1.74
CLDN3O15551 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.19□□□□□ -1.74
CLDN3O15551 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.19□□□□□ -1.74
CLDN3O15551 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.19□□□□□ -1.74
CLDN3O15551 AL356535.1-201ENST00000440335 398 ntBASIC4.19□□□□□ -1.74
CLDN3O15551 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.19□□□□□ -1.74
CLDN3O15551 AC093853.1-201ENST00000515689 483 ntBASIC4.19□□□□□ -1.74
CLDN3O15551 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.19□□□□□ -1.74
CLDN3O15551 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.19□□□□□ -1.74
CLDN3O15551 HMGB1P23-201ENST00000518743 568 ntBASIC4.19□□□□□ -1.74
CLDN3O15551 AC008562.1-201ENST00000521763 330 ntBASIC4.19□□□□□ -1.74
CLDN3O15551 AC022695.1-201ENST00000522089 237 ntBASIC4.19□□□□□ -1.74
CLDN3O15551 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.19□□□□□ -1.74
CLDN3O15551 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.19□□□□□ -1.74
CLDN3O15551 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.19□□□□□ -1.74
CLDN3O15551 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.19□□□□□ -1.74
CLDN3O15551 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.19□□□□□ -1.74
CLDN3O15551 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.19□□□□□ -1.74
CLDN3O15551 AC115621.1-201ENST00000604653 858 ntBASIC4.19□□□□□ -1.74
CLDN3O15551 AL450270.1-201ENST00000606160 391 ntBASIC4.19□□□□□ -1.74
CLDN3O15551 AP003392.5-201ENST00000607857 415 ntBASIC4.19□□□□□ -1.74
CLDN3O15551 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.19□□□□□ -1.74
CLDN3O15551 AC005344.1-201ENST00000613391 459 ntBASIC4.19□□□□□ -1.74
CLDN3O15551 AC003001.2-201ENST00000616294 831 ntBASIC4.19□□□□□ -1.74
CLDN3O15551 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.19□□□□□ -1.74
CLDN3O15551 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CLDN3O15551 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.19□□□□□ -1.74
CLDN3O15551 BDP1P-201ENST00000582658 1990 ntBASIC4.19□□□□□ -1.74
CLDN3O15551 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CLDN3O15551 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
CLDN3O15551 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.19□□□□□ -1.74
CLDN3O15551 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLDN3O15551 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN3O15551 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN3O15551 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN3O15551 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN3O15551 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN3O15551 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN3O15551 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN3O15551 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms