Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.15□□□□□ -1.75
CLDN4O14493 AC011266.1-201ENST00000624119 3569 ntBASIC4.15□□□□□ -1.75
CLDN4O14493 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLDN4O14493 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.15□□□□□ -1.75
CLDN4O14493 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.15□□□□□ -1.75
CLDN4O14493 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.15□□□□□ -1.75
CLDN4O14493 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CLDN4O14493 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.14□□□□□ -1.75
CLDN4O14493 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLDN4O14493 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.14□□□□□ -1.75
CLDN4O14493 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
CLDN4O14493 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CLDN4O14493 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
CLDN4O14493 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CLDN4O14493 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
CLDN4O14493 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
CLDN4O14493 SNORD96B-201ENST00000386148 79 ntBASIC4.14□□□□□ -1.75
CLDN4O14493 MTCO1P56-201ENST00000401674 224 ntBASIC4.14□□□□□ -1.75
CLDN4O14493 SNORA11F-201ENST00000408237 128 ntBASIC4.14□□□□□ -1.75
CLDN4O14493 RNU2-21P-201ENST00000410368 188 ntBASIC4.14□□□□□ -1.75
CLDN4O14493 SNORA74C-2-201ENST00000411179 201 ntBASIC4.14□□□□□ -1.75
CLDN4O14493 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.14□□□□□ -1.75
CLDN4O14493 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.14□□□□□ -1.75
CLDN4O14493 NPM1P34-201ENST00000428821 893 ntBASIC4.14□□□□□ -1.75
CLDN4O14493 RPL36P19-201ENST00000430744 301 ntBASIC4.14□□□□□ -1.75
CLDN4O14493 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.14□□□□□ -1.75
CLDN4O14493 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.14□□□□□ -1.75
CLDN4O14493 AC073143.1-201ENST00000436316 395 ntBASIC4.14□□□□□ -1.75
CLDN4O14493 UBE2V1P3-201ENST00000439651 417 ntBASIC4.14□□□□□ -1.75
CLDN4O14493 AC069285.2-201ENST00000440210 275 ntBASIC4.14□□□□□ -1.75
CLDN4O14493 ARL4AP3-201ENST00000441452 574 ntBASIC4.14□□□□□ -1.75
CLDN4O14493 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLDN4O14493 AC239367.2-201ENST00000447309 705 ntBASIC4.14□□□□□ -1.75
CLDN4O14493 MRPL42P4-201ENST00000453267 443 ntBASIC4.14□□□□□ -1.75
CLDN4O14493 DHFRP3-201ENST00000455595 559 ntBASIC4.14□□□□□ -1.75
CLDN4O14493 RPL21P71-201ENST00000465598 459 ntBASIC4.14□□□□□ -1.75
CLDN4O14493 RPS20P21-201ENST00000466859 343 ntBASIC4.14□□□□□ -1.75
CLDN4O14493 GAPDHP39-201ENST00000481866 979 ntBASIC4.14□□□□□ -1.75
CLDN4O14493 UBE2V1P12-201ENST00000503954 474 ntBASIC4.14□□□□□ -1.75
CLDN4O14493 AC048346.1-201ENST00000510247 144 ntBASIC4.14□□□□□ -1.75
CLDN4O14493 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.14□□□□□ -1.75
CLDN4O14493 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.14□□□□□ -1.75
CLDN4O14493 AP001207.1-201ENST00000524051 481 ntBASIC4.14□□□□□ -1.75
CLDN4O14493 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.14□□□□□ -1.75
CLDN4O14493 DEFB130C-202ENST00000530001 230 ntBASIC4.14□□□□□ -1.75
CLDN4O14493 PTP4A1P6-201ENST00000531034 478 ntBASIC4.14□□□□□ -1.75
CLDN4O14493 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.14□□□□□ -1.75
CLDN4O14493 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.14□□□□□ -1.75
CLDN4O14493 AC074029.1-201ENST00000552531 1044 ntBASIC4.14□□□□□ -1.75
CLDN4O14493 AC124068.1-201ENST00000563131 678 ntBASIC4.14□□□□□ -1.75
CLDN4O14493 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.14□□□□□ -1.75
CLDN4O14493 MIR4509-3-201ENST00000578671 94 ntBASIC4.14□□□□□ -1.75
CLDN4O14493 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.14□□□□□ -1.75
CLDN4O14493 MIR4666A-201ENST00000580160 79 ntBASIC4.14□□□□□ -1.75
CLDN4O14493 MIR4509-2-201ENST00000583920 94 ntBASIC4.14□□□□□ -1.75
CLDN4O14493 AC245884.10-201ENST00000597355 337 ntBASIC4.14□□□□□ -1.75
CLDN4O14493 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.14□□□□□ -1.75
CLDN4O14493 AL445435.1-201ENST00000604232 665 ntBASIC4.14□□□□□ -1.75
CLDN4O14493 AC113403.1-201ENST00000604910 193 ntBASIC4.14□□□□□ -1.75
CLDN4O14493 OR6R2P-201ENST00000609216 300 ntBASIC4.14□□□□□ -1.75
CLDN4O14493 PART1_2.1-201ENST00000612397 250 ntBASIC4.14□□□□□ -1.75
CLDN4O14493 AC105227.2-201ENST00000615075 605 ntBASIC4.14□□□□□ -1.75
CLDN4O14493 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.14□□□□□ -1.75
CLDN4O14493 MIR4509-1-201ENST00000618224 94 ntBASIC4.14□□□□□ -1.75
CLDN4O14493 MIR6891-201ENST00000618788 93 ntBASIC4.14□□□□□ -1.75
CLDN4O14493 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLDN4O14493 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CLDN4O14493 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.14□□□□□ -1.75
CLDN4O14493 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CLDN4O14493 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CLDN4O14493 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CLDN4O14493 ERCC6-202ENST00000374127 1782 ntBASIC4.13□□□□□ -1.75
CLDN4O14493 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CLDN4O14493 RNU1-130P-201ENST00000363930 160 ntBASIC4.13□□□□□ -1.75
CLDN4O14493 RNA5SP175-201ENST00000364275 119 ntBASIC4.13□□□□□ -1.75
CLDN4O14493 RNA5SP22-201ENST00000365393 109 ntBASIC4.13□□□□□ -1.75
CLDN4O14493 RNA5SP151-201ENST00000365632 117 ntBASIC4.13□□□□□ -1.75
CLDN4O14493 RNU6-444P-201ENST00000383988 108 ntBASIC4.13□□□□□ -1.75
CLDN4O14493 ZNF602P-201ENST00000405929 924 ntBASIC4.13□□□□□ -1.75
CLDN4O14493 MIR1193-201ENST00000408109 78 ntBASIC4.13□□□□□ -1.75
CLDN4O14493 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.13□□□□□ -1.75
CLDN4O14493 UBTFL3-201ENST00000418934 1024 ntBASIC4.13□□□□□ -1.75
CLDN4O14493 AL592293.2-201ENST00000422292 996 ntBASIC4.13□□□□□ -1.75
CLDN4O14493 AC004448.2-201ENST00000422360 586 ntBASIC4.13□□□□□ -1.75
CLDN4O14493 CHIAP3-201ENST00000423668 1133 ntBASIC4.13□□□□□ -1.75
CLDN4O14493 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.13□□□□□ -1.75
CLDN4O14493 AC234779.1-201ENST00000425910 285 ntBASIC4.13□□□□□ -1.75
CLDN4O14493 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.13□□□□□ -1.75
CLDN4O14493 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.13□□□□□ -1.75
CLDN4O14493 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.13□□□□□ -1.75
CLDN4O14493 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.13□□□□□ -1.75
CLDN4O14493 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.13□□□□□ -1.75
CLDN4O14493 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.13□□□□□ -1.75
CLDN4O14493 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CLDN4O14493 AL358794.1-201ENST00000445689 381 ntBASIC4.13□□□□□ -1.75
CLDN4O14493 EIF2S2P2-201ENST00000447161 982 ntBASIC4.13□□□□□ -1.75
CLDN4O14493 EXOSC3P1-201ENST00000448649 500 ntBASIC4.13□□□□□ -1.75
CLDN4O14493 NDUFS5P3-201ENST00000450668 321 ntBASIC4.13□□□□□ -1.75
CLDN4O14493 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.13□□□□□ -1.75
CLDN4O14493 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms