Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.93□□□□□ -1.62
TRIM38O00635 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.93□□□□□ -1.62
TRIM38O00635 OR5BE1P-202ENST00000641168 1176 ntBASIC4.93□□□□□ -1.62
TRIM38O00635 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
TRIM38O00635 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM38O00635 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM38O00635 AC022893.2-201ENST00000564832 3296 ntBASIC4.93□□□□□ -1.62
TRIM38O00635 AC011978.2-201ENST00000569835 2054 ntBASIC4.93□□□□□ -1.62
TRIM38O00635 MAPK10-304ENST00000641341 3984 ntBASIC4.93□□□□□ -1.62
TRIM38O00635 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM38O00635 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM38O00635 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.92□□□□□ -1.62
TRIM38O00635 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
TRIM38O00635 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM38O00635 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.92□□□□□ -1.62
TRIM38O00635 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM38O00635 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
TRIM38O00635 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.92□□□□□ -1.62
TRIM38O00635 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
TRIM38O00635 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.92□□□□□ -1.62
TRIM38O00635 FAM133CP-201ENST00000332869 704 ntBASIC4.92□□□□□ -1.62
TRIM38O00635 RN7SKP113-201ENST00000363891 295 ntBASIC4.92□□□□□ -1.62
TRIM38O00635 Y_RNA.192-201ENST00000363977 102 ntBASIC4.92□□□□□ -1.62
TRIM38O00635 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM38O00635 RNU6-1293P-201ENST00000384077 107 ntBASIC4.92□□□□□ -1.62
TRIM38O00635 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.92□□□□□ -1.62
TRIM38O00635 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM38O00635 AL512430.2-201ENST00000406786 339 ntBASIC4.92□□□□□ -1.62
TRIM38O00635 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
TRIM38O00635 RNA5SP113-201ENST00000410486 84 ntBASIC4.92□□□□□ -1.62
TRIM38O00635 EIF4A1P3-201ENST00000411521 244 ntBASIC4.92□□□□□ -1.62
TRIM38O00635 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.92□□□□□ -1.62
TRIM38O00635 AL390023.1-201ENST00000428836 262 ntBASIC4.92□□□□□ -1.62
TRIM38O00635 AL035407.1-201ENST00000429211 571 ntBASIC4.92□□□□□ -1.62
TRIM38O00635 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.92□□□□□ -1.62
TRIM38O00635 UBE2D3P1-201ENST00000436669 444 ntBASIC4.92□□□□□ -1.62
TRIM38O00635 AC105402.2-201ENST00000438503 358 ntBASIC4.92□□□□□ -1.62
TRIM38O00635 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.92□□□□□ -1.62
TRIM38O00635 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.92□□□□□ -1.62
TRIM38O00635 OR7E125P-201ENST00000443450 846 ntBASIC4.92□□□□□ -1.62
TRIM38O00635 RPL36AP15-201ENST00000444514 266 ntBASIC4.92□□□□□ -1.62
TRIM38O00635 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM38O00635 TCEA1P1-201ENST00000449716 880 ntBASIC4.92□□□□□ -1.62
TRIM38O00635 HMGB3P21-201ENST00000452483 547 ntBASIC4.92□□□□□ -1.62
TRIM38O00635 NDUFA5P7-201ENST00000452914 242 ntBASIC4.92□□□□□ -1.62
TRIM38O00635 CYCSP34-201ENST00000458172 304 ntBASIC4.92□□□□□ -1.62
TRIM38O00635 AC097173.1-201ENST00000505862 819 ntBASIC4.92□□□□□ -1.62
TRIM38O00635 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.92□□□□□ -1.62
TRIM38O00635 AC008837.2-201ENST00000513076 418 ntBASIC4.92□□□□□ -1.62
TRIM38O00635 RN7SKP82-201ENST00000516786 223 ntBASIC4.92□□□□□ -1.62
TRIM38O00635 AC027309.2-201ENST00000520566 192 ntBASIC4.92□□□□□ -1.62
TRIM38O00635 AC022790.1-201ENST00000522872 204 ntBASIC4.92□□□□□ -1.62
TRIM38O00635 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.92□□□□□ -1.62
TRIM38O00635 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.92□□□□□ -1.62
TRIM38O00635 RFPL1S-203ENST00000539579 330 ntBASIC4.92□□□□□ -1.62
TRIM38O00635 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.92□□□□□ -1.62
TRIM38O00635 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.92□□□□□ -1.62
TRIM38O00635 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.92□□□□□ -1.62
TRIM38O00635 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.92□□□□□ -1.62
TRIM38O00635 AC010198.2-201ENST00000550612 259 ntBASIC4.92□□□□□ -1.62
TRIM38O00635 AC024909.2-201ENST00000553035 286 ntBASIC4.92□□□□□ -1.62
TRIM38O00635 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.92□□□□□ -1.62
TRIM38O00635 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.92□□□□□ -1.62
TRIM38O00635 EIF5A2P1-201ENST00000564027 460 ntBASIC4.92□□□□□ -1.62
TRIM38O00635 AC074051.3-201ENST00000570238 358 ntBASIC4.92□□□□□ -1.62
TRIM38O00635 MIR4697-201ENST00000582977 78 ntBASIC4.92□□□□□ -1.62
TRIM38O00635 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.92□□□□□ -1.62
TRIM38O00635 AC011477.5-201ENST00000586571 259 ntBASIC4.92□□□□□ -1.62
TRIM38O00635 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.92□□□□□ -1.62
TRIM38O00635 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.92□□□□□ -1.62
TRIM38O00635 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.92□□□□□ -1.62
TRIM38O00635 AL021997.1-201ENST00000605757 193 ntBASIC4.92□□□□□ -1.62
TRIM38O00635 RNU6-156P-201ENST00000621869 107 ntBASIC4.92□□□□□ -1.62
TRIM38O00635 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.92□□□□□ -1.62
TRIM38O00635 MKKS-204ENST00000639674 192 ntBASIC4.92□□□□□ -1.62
TRIM38O00635 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM38O00635 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
TRIM38O00635 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM38O00635 AC083843.3-201ENST00000623679 2186 ntBASIC4.92□□□□□ -1.62
TRIM38O00635 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM38O00635 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.92□□□□□ -1.62
TRIM38O00635 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM38O00635 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.92□□□□□ -1.62
TRIM38O00635 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM38O00635 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM38O00635 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM38O00635 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
TRIM38O00635 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM38O00635 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM38O00635 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM38O00635 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM38O00635 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM38O00635 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.91□□□□□ -1.62
TRIM38O00635 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM38O00635 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM38O00635 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM38O00635 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
TRIM38O00635 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
TRIM38O00635 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
TRIM38O00635 RNU6-83P-201ENST00000384568 112 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms