Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.69□□□□□ -1.82
TMX2-CTNND1H3BSU7 RPS7P15-201ENST00000415804 584 ntBASIC3.69□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC008280.1-201ENST00000418851 412 ntBASIC3.69□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC002075.2-201ENST00000425207 252 ntBASIC3.69□□□□□ -1.82
TMX2-CTNND1H3BSU7 HMGN2P31-201ENST00000432430 273 ntBASIC3.69□□□□□ -1.82
TMX2-CTNND1H3BSU7 HSPD1P21-201ENST00000436541 245 ntBASIC3.69□□□□□ -1.82
TMX2-CTNND1H3BSU7 AP000936.3-201ENST00000438127 255 ntBASIC3.69□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.69□□□□□ -1.82
TMX2-CTNND1H3BSU7 RPL32P34-201ENST00000486380 400 ntBASIC3.69□□□□□ -1.82
TMX2-CTNND1H3BSU7 CAB39P1-201ENST00000502277 460 ntBASIC3.69□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.69□□□□□ -1.82
TMX2-CTNND1H3BSU7 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.69□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC005798.1-201ENST00000513715 387 ntBASIC3.69□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.69□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC087369.1-201ENST00000520775 996 ntBASIC3.69□□□□□ -1.82
TMX2-CTNND1H3BSU7 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.69□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC091515.1-201ENST00000548110 679 ntBASIC3.69□□□□□ -1.82
TMX2-CTNND1H3BSU7 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.69□□□□□ -1.82
TMX2-CTNND1H3BSU7 SNRPGP1-201ENST00000553864 222 ntBASIC3.69□□□□□ -1.82
TMX2-CTNND1H3BSU7 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC012414.2-201ENST00000559474 187 ntBASIC3.69□□□□□ -1.82
TMX2-CTNND1H3BSU7 AL731537.2-201ENST00000561565 951 ntBASIC3.69□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.69□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.69□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC073111.2-201ENST00000605657 1075 ntBASIC3.69□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.69□□□□□ -1.82
TMX2-CTNND1H3BSU7 AL354760.1-201ENST00000608357 643 ntBASIC3.69□□□□□ -1.82
TMX2-CTNND1H3BSU7 AL159169.3-201ENST00000608871 561 ntBASIC3.69□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC016957.2-201ENST00000616998 848 ntBASIC3.69□□□□□ -1.82
TMX2-CTNND1H3BSU7 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.69□□□□□ -1.82
TMX2-CTNND1H3BSU7 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.69□□□□□ -1.82
TMX2-CTNND1H3BSU7 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TMX2-CTNND1H3BSU7 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TMX2-CTNND1H3BSU7 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
TMX2-CTNND1H3BSU7 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.69□□□□□ -1.82
TMX2-CTNND1H3BSU7 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.68□□□□□ -1.82
TMX2-CTNND1H3BSU7 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TMX2-CTNND1H3BSU7 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TMX2-CTNND1H3BSU7 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.68□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC073346.2-201ENST00000624724 2058 ntBASIC3.68□□□□□ -1.82
TMX2-CTNND1H3BSU7 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TMX2-CTNND1H3BSU7 MIR7-1-201ENST00000384871 110 ntBASIC3.68□□□□□ -1.82
TMX2-CTNND1H3BSU7 MIR218-2-201ENST00000385006 110 ntBASIC3.68□□□□□ -1.82
TMX2-CTNND1H3BSU7 MIR483-201ENST00000385070 76 ntBASIC3.68□□□□□ -1.82
TMX2-CTNND1H3BSU7 RPL5P19-201ENST00000404228 893 ntBASIC3.68□□□□□ -1.82
TMX2-CTNND1H3BSU7 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC3.68□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC093578.1-201ENST00000415219 368 ntBASIC3.68□□□□□ -1.82
TMX2-CTNND1H3BSU7 AL590623.1-201ENST00000427864 105 ntBASIC3.68□□□□□ -1.82
TMX2-CTNND1H3BSU7 MTCO1P45-201ENST00000431457 267 ntBASIC3.68□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC096638.2-201ENST00000434965 711 ntBASIC3.68□□□□□ -1.82
TMX2-CTNND1H3BSU7 RANP8-201ENST00000444720 713 ntBASIC3.68□□□□□ -1.82
TMX2-CTNND1H3BSU7 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.68□□□□□ -1.82
TMX2-CTNND1H3BSU7 RPS3AP46-201ENST00000448352 682 ntBASIC3.68□□□□□ -1.82
TMX2-CTNND1H3BSU7 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.68□□□□□ -1.82
TMX2-CTNND1H3BSU7 MTCO3P16-201ENST00000454456 754 ntBASIC3.68□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC018635.1-201ENST00000468292 1030 ntBASIC3.68□□□□□ -1.82
TMX2-CTNND1H3BSU7 ACTR6P1-201ENST00000514311 1104 ntBASIC3.68□□□□□ -1.82
TMX2-CTNND1H3BSU7 RNU6-352P-201ENST00000516908 107 ntBASIC3.68□□□□□ -1.82
TMX2-CTNND1H3BSU7 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.68□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.68□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.68□□□□□ -1.82
TMX2-CTNND1H3BSU7 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.68□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC084757.1-201ENST00000559987 490 ntBASIC3.68□□□□□ -1.82
TMX2-CTNND1H3BSU7 AL133457.1-201ENST00000564251 987 ntBASIC3.68□□□□□ -1.82
TMX2-CTNND1H3BSU7 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.68□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC244205.2-202ENST00000635781 342 ntBASIC3.68□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC092079.1-201ENST00000558620 1985 ntBASIC3.68□□□□□ -1.82
TMX2-CTNND1H3BSU7 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TMX2-CTNND1H3BSU7 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.68□□□□□ -1.82
TMX2-CTNND1H3BSU7 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TMX2-CTNND1H3BSU7 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.68□□□□□ -1.82
TMX2-CTNND1H3BSU7 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TMX2-CTNND1H3BSU7 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TMX2-CTNND1H3BSU7 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TMX2-CTNND1H3BSU7 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TMX2-CTNND1H3BSU7 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 MTND5P1-201ENST00000445440 1375 ntBASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 UBE3AP2-201ENST00000429033 2259 ntBASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 RPS3AP25-201ENST00000411660 793 ntBASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 SYF2P2-201ENST00000417620 583 ntBASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 RPL21P109-201ENST00000422213 475 ntBASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 AL445528.1-201ENST00000426330 420 ntBASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC114878.1-201ENST00000441166 358 ntBASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 RPS15AP29-201ENST00000445539 400 ntBASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC026784.1-201ENST00000507986 352 ntBASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 RNU6-1231P-201ENST00000517185 103 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms