Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC78A2IDD5 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC78A2IDD5 MIR4700-201ENST00000578311 74 ntBASIC5.05□□□□□ -1.6
CCDC78A2IDD5 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC78A2IDD5 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC78A2IDD5 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC78A2IDD5 AC018695.5-201ENST00000605872 315 ntBASIC5.05□□□□□ -1.6
CCDC78A2IDD5 AC106028.5-201ENST00000610332 395 ntBASIC5.05□□□□□ -1.6
CCDC78A2IDD5 AL121612.2-201ENST00000612261 482 ntBASIC5.05□□□□□ -1.6
CCDC78A2IDD5 AC010678.1-201ENST00000614118 713 ntBASIC5.05□□□□□ -1.6
CCDC78A2IDD5 U6.42-201ENST00000618440 107 ntBASIC5.05□□□□□ -1.6
CCDC78A2IDD5 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC78A2IDD5 AC015908.5-201ENST00000623289 343 ntBASIC5.05□□□□□ -1.6
CCDC78A2IDD5 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC78A2IDD5 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC78A2IDD5 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC78A2IDD5 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC78A2IDD5 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CCDC78A2IDD5 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC78A2IDD5 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC78A2IDD5 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC78A2IDD5 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC78A2IDD5 AL672167.1-204ENST00000641875 3017 ntBASIC5.05□□□□□ -1.6
CCDC78A2IDD5 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC78A2IDD5 NEAT1-202ENST00000501122 22743 ntBASIC5.04□□□□□ -1.6
CCDC78A2IDD5 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC78A2IDD5 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC78A2IDD5 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC78A2IDD5 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
CCDC78A2IDD5 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC78A2IDD5 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CCDC78A2IDD5 RNU5D-1-201ENST00000363299 116 ntBASIC5.04□□□□□ -1.6
CCDC78A2IDD5 RNU6-1042P-201ENST00000384204 107 ntBASIC5.04□□□□□ -1.6
CCDC78A2IDD5 RNU1-106P-201ENST00000384382 164 ntBASIC5.04□□□□□ -1.6
CCDC78A2IDD5 MIR765-201ENST00000390226 114 ntBASIC5.04□□□□□ -1.6
CCDC78A2IDD5 ATP5F1P4-201ENST00000397288 746 ntBASIC5.04□□□□□ -1.6
CCDC78A2IDD5 AC136624.1-201ENST00000400791 413 ntBASIC5.04□□□□□ -1.6
CCDC78A2IDD5 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.04□□□□□ -1.6
CCDC78A2IDD5 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC78A2IDD5 PIGPP2-201ENST00000411569 458 ntBASIC5.04□□□□□ -1.6
CCDC78A2IDD5 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC78A2IDD5 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC78A2IDD5 CYCSP46-201ENST00000423569 204 ntBASIC5.04□□□□□ -1.6
CCDC78A2IDD5 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC78A2IDD5 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC78A2IDD5 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC78A2IDD5 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC78A2IDD5 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC78A2IDD5 AC092809.1-201ENST00000441469 474 ntBASIC5.04□□□□□ -1.6
CCDC78A2IDD5 MTND1P1-201ENST00000445453 368 ntBASIC5.04□□□□□ -1.6
CCDC78A2IDD5 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC78A2IDD5 EIF4A1P11-201ENST00000451239 222 ntBASIC5.04□□□□□ -1.6
CCDC78A2IDD5 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC78A2IDD5 RPL37P3-201ENST00000456825 293 ntBASIC5.04□□□□□ -1.6
CCDC78A2IDD5 RPL7AP6-201ENST00000477943 801 ntBASIC5.04□□□□□ -1.6
CCDC78A2IDD5 HMGN2P25-201ENST00000486956 268 ntBASIC5.04□□□□□ -1.6
CCDC78A2IDD5 AC231760.1-201ENST00000498002 260 ntBASIC5.04□□□□□ -1.6
CCDC78A2IDD5 SNRPCP2-201ENST00000504370 475 ntBASIC5.04□□□□□ -1.6
CCDC78A2IDD5 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC78A2IDD5 RN7SKP260-201ENST00000516907 149 ntBASIC5.04□□□□□ -1.6
CCDC78A2IDD5 AC105031.1-201ENST00000518550 476 ntBASIC5.04□□□□□ -1.6
CCDC78A2IDD5 COX6B1P6-201ENST00000522347 255 ntBASIC5.04□□□□□ -1.6
CCDC78A2IDD5 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CCDC78A2IDD5 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC78A2IDD5 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CCDC78A2IDD5 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.04□□□□□ -1.6
CCDC78A2IDD5 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC78A2IDD5 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC78A2IDD5 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC78A2IDD5 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC78A2IDD5 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC78A2IDD5 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC78A2IDD5 AC018926.3-201ENST00000618841 406 ntBASIC5.04□□□□□ -1.6
CCDC78A2IDD5 AC073534.2-201ENST00000620377 381 ntBASIC5.04□□□□□ -1.6
CCDC78A2IDD5 AP000648.2-201ENST00000624182 404 ntBASIC5.04□□□□□ -1.6
CCDC78A2IDD5 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC78A2IDD5 AC068137.3-201ENST00000639191 341 ntBASIC5.04□□□□□ -1.6
CCDC78A2IDD5 AC073869.6-201ENST00000640656 341 ntBASIC5.04□□□□□ -1.6
CCDC78A2IDD5 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CCDC78A2IDD5 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC78A2IDD5 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC78A2IDD5 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC78A2IDD5 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CCDC78A2IDD5 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC78A2IDD5 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC78A2IDD5 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CCDC78A2IDD5 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC78A2IDD5 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC78A2IDD5 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
CCDC78A2IDD5 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.03□□□□□ -1.6
CCDC78A2IDD5 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CCDC78A2IDD5 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.03□□□□□ -1.6
CCDC78A2IDD5 DCAF13P3-201ENST00000561147 1334 ntBASIC5.03□□□□□ -1.6
CCDC78A2IDD5 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC78A2IDD5 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC78A2IDD5 DDX18P3-201ENST00000404856 2007 ntBASIC5.03□□□□□ -1.6
CCDC78A2IDD5 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC78A2IDD5 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC78A2IDD5 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC78A2IDD5 SNURFL-201ENST00000309296 343 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms