Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 AP002906.1-201ENST00000603405 233 ntBASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 AL139395.1-201ENST00000603662 160 ntBASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 AL136370.1-201ENST00000608166 691 ntBASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 AC092653.1-201ENST00000608509 531 ntBASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 AL359535.1-201ENST00000612100 1087 ntBASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 MIR8059-201ENST00000620427 81 ntBASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 ZNF849P-201ENST00000594711 1566 ntBASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 AL133412.1-201ENST00000380194 2992 ntBASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 AC073055.1-201ENST00000456901 1621 ntBASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 AL121657.1-201ENST00000327215 531 ntBASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 MIR93-201ENST00000385024 80 ntBASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 RPS26P8-201ENST00000393490 348 ntBASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 PRRC2CP1-201ENST00000404428 159 ntBASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 AL450992.3-201ENST00000413192 568 ntBASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 YWHAEP5-201ENST00000431545 765 ntBASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 GSTA7P-201ENST00000438425 448 ntBASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 UBE2V1P5-201ENST00000440070 405 ntBASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 AC006011.1-201ENST00000442758 349 ntBASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 MTND1P33-201ENST00000446251 917 ntBASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 DNAJC19P8-201ENST00000452887 259 ntBASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 RPL7P19-201ENST00000469948 618 ntBASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 RPS27AP13-201ENST00000498403 237 ntBASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 AC017037.1-201ENST00000508460 471 ntBASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 AC011611.5-201ENST00000552477 578 ntBASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 SERPINE4P-201ENST00000554978 281 ntBASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 AC025884.1-201ENST00000556034 378 ntBASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 RN7SL600P-201ENST00000581811 299 ntBASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 AC006116.5-201ENST00000591936 559 ntBASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 AC008638.3-201ENST00000603341 463 ntBASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 AC025946.2-201ENST00000603398 234 ntBASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 AP003117.2-201ENST00000606010 545 ntBASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 OR6R2P-201ENST00000609216 300 ntBASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 AC068831.8-201ENST00000620171 435 ntBASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 AC116667.1-201ENST00000604855 2072 ntBASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.91□□□□□ -1.78
ATG4BQ9Y4P1 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
ATG4BQ9Y4P1 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
ATG4BQ9Y4P1 RN7SKP227-201ENST00000364445 330 ntBASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 MIR525-201ENST00000384978 85 ntBASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 DNAJC19P6-201ENST00000401853 280 ntBASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms