Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 SNX18P3-202ENST00000565670 1750 ntBASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 AC010329.1-201ENST00000593903 8328 ntBASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 AC010894.1-201ENST00000313760 361 ntBASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 RNA5SP321-201ENST00000362722 111 ntBASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 RNU6-522P-201ENST00000364497 107 ntBASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 Y_RNA.252-201ENST00000364556 101 ntBASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 Y_RNA.447-201ENST00000384184 113 ntBASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 SNORA7A-201ENST00000384765 139 ntBASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 RNU1-149P-201ENST00000390870 161 ntBASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 AL139397.2-201ENST00000404529 772 ntBASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 RN7SKP296-201ENST00000411185 341 ntBASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 DPH3P2-201ENST00000422618 250 ntBASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 BRWD1P3-201ENST00000428816 390 ntBASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 TRAPPC2P3-201ENST00000443200 321 ntBASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 GAPDHP23-201ENST00000444823 993 ntBASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 RPL22P13-201ENST00000493291 347 ntBASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 FTH1P8-201ENST00000498161 514 ntBASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 HMGB3P17-201ENST00000504195 649 ntBASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 AL390198.2-201ENST00000510553 222 ntBASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 RN7SKP196-201ENST00000516267 345 ntBASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 RNU6-714P-201ENST00000516963 103 ntBASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 NARSP2-201ENST00000518524 679 ntBASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 AC008687.2-201ENST00000597865 520 ntBASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 AC091133.5-201ENST00000603088 301 ntBASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 AC141273.2-201ENST00000618989 130 ntBASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 AC068213.1-201ENST00000625124 226 ntBASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 AL354702.2-202ENST00000641481 890 ntBASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 MTND5P30-201ENST00000452896 1731 ntBASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 AC025125.1-201ENST00000624743 1922 ntBASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 RNA5SP308-201ENST00000362532 115 ntBASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 RNA5SP188-201ENST00000362916 129 ntBASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 RNU6-251P-201ENST00000363235 104 ntBASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 SNORD35A-201ENST00000363389 86 ntBASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 SNORA38B-201ENST00000363524 131 ntBASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 RNU4-64P-201ENST00000410795 131 ntBASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 RNU6-954P-201ENST00000411355 107 ntBASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 RPS6P23-201ENST00000413224 722 ntBASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 AC233981.1-201ENST00000423224 461 ntBASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 RPS26P47-201ENST00000427219 348 ntBASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 ZDHHC20P1-204ENST00000435787 423 ntBASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 RPL21P23-201ENST00000446654 460 ntBASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 MIR2053-201ENST00000459295 91 ntBASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 AC090142.1-201ENST00000465776 462 ntBASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 AC092324.1-201ENST00000468671 324 ntBASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 PPP1R11P1-201ENST00000486095 376 ntBASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 AC015524.1-201ENST00000491585 472 ntBASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 HIGD1AP14-201ENST00000507617 282 ntBASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 RN7SKP24-201ENST00000515888 284 ntBASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 AP001804.3-201ENST00000525146 880 ntBASIC6.41□□□□□ -1.38
CUEDC1Q9NWM3 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 147.7 ms