Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSU72Q9NP77 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSU72Q9NP77 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSU72Q9NP77 KPNA2P2-201ENST00000419546 1489 ntBASIC5.73□□□□□ -1.49
SSU72Q9NP77 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
SSU72Q9NP77 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSU72Q9NP77 SELENOWP1-201ENST00000322792 252 ntBASIC5.73□□□□□ -1.49
SSU72Q9NP77 RNU6-223P-201ENST00000362830 107 ntBASIC5.73□□□□□ -1.49
SSU72Q9NP77 RNU1-134P-201ENST00000362935 165 ntBASIC5.73□□□□□ -1.49
SSU72Q9NP77 Y_RNA.184-201ENST00000363884 108 ntBASIC5.73□□□□□ -1.49
SSU72Q9NP77 RNU6-169P-201ENST00000365336 107 ntBASIC5.73□□□□□ -1.49
SSU72Q9NP77 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.73□□□□□ -1.49
SSU72Q9NP77 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC5.73□□□□□ -1.49
SSU72Q9NP77 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SSU72Q9NP77 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SSU72Q9NP77 AC005042.1-201ENST00000393397 800 ntBASIC5.73□□□□□ -1.49
SSU72Q9NP77 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.73□□□□□ -1.49
SSU72Q9NP77 AC019097.1-201ENST00000424783 735 ntBASIC5.73□□□□□ -1.49
SSU72Q9NP77 PRUNEP1-201ENST00000425846 705 ntBASIC5.73□□□□□ -1.49
SSU72Q9NP77 AC022022.1-201ENST00000430304 178 ntBASIC5.73□□□□□ -1.49
SSU72Q9NP77 RPS26P40-201ENST00000435209 294 ntBASIC5.73□□□□□ -1.49
SSU72Q9NP77 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.73□□□□□ -1.49
SSU72Q9NP77 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC5.73□□□□□ -1.49
SSU72Q9NP77 ATP5LP5-201ENST00000483050 299 ntBASIC5.73□□□□□ -1.49
SSU72Q9NP77 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.73□□□□□ -1.49
SSU72Q9NP77 AC015524.1-201ENST00000491585 472 ntBASIC5.73□□□□□ -1.49
SSU72Q9NP77 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.73□□□□□ -1.49
SSU72Q9NP77 AC122688.1-201ENST00000541494 223 ntBASIC5.73□□□□□ -1.49
SSU72Q9NP77 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.73□□□□□ -1.49
SSU72Q9NP77 SCOCP1-201ENST00000554676 349 ntBASIC5.73□□□□□ -1.49
SSU72Q9NP77 HSPE1P2-201ENST00000554777 306 ntBASIC5.73□□□□□ -1.49
SSU72Q9NP77 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC5.73□□□□□ -1.49
SSU72Q9NP77 MIR4701-201ENST00000583094 63 ntBASIC5.73□□□□□ -1.49
SSU72Q9NP77 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.73□□□□□ -1.49
SSU72Q9NP77 AC010525.2-201ENST00000590920 195 ntBASIC5.73□□□□□ -1.49
SSU72Q9NP77 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC5.73□□□□□ -1.49
SSU72Q9NP77 AC005899.7-201ENST00000618199 588 ntBASIC5.73□□□□□ -1.49
SSU72Q9NP77 AC008121.3-201ENST00000618726 433 ntBASIC5.73□□□□□ -1.49
SSU72Q9NP77 AL122023.1-201ENST00000622847 530 ntBASIC5.73□□□□□ -1.49
SSU72Q9NP77 AC090617.10-201ENST00000624308 134 ntBASIC5.73□□□□□ -1.49
SSU72Q9NP77 AC010149.2-201ENST00000637608 315 ntBASIC5.73□□□□□ -1.49
SSU72Q9NP77 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC5.73□□□□□ -1.49
SSU72Q9NP77 U6.101-201ENST00000637707 76 ntBASIC5.73□□□□□ -1.49
SSU72Q9NP77 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SSU72Q9NP77 LINC01613-201ENST00000561476 2780 ntBASIC5.73□□□□□ -1.49
SSU72Q9NP77 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSU72Q9NP77 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
SSU72Q9NP77 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSU72Q9NP77 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
SSU72Q9NP77 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.73□□□□□ -1.49
SSU72Q9NP77 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSU72Q9NP77 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SSU72Q9NP77 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSU72Q9NP77 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.73□□□□□ -1.49
SSU72Q9NP77 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SSU72Q9NP77 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SSU72Q9NP77 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
SSU72Q9NP77 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.73□□□□□ -1.49
SSU72Q9NP77 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.73□□□□□ -1.49
SSU72Q9NP77 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.72□□□□□ -1.49
SSU72Q9NP77 THUMPD3P1-201ENST00000506556 1480 ntBASIC5.72□□□□□ -1.49
SSU72Q9NP77 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC5.72□□□□□ -1.49
SSU72Q9NP77 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SSU72Q9NP77 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
SSU72Q9NP77 TCP11X1-202ENST00000622971 1372 ntBASIC5.72□□□□□ -1.49
SSU72Q9NP77 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.72□□□□□ -1.49
SSU72Q9NP77 RPL23AP57-201ENST00000332361 466 ntBASIC5.72□□□□□ -1.49
SSU72Q9NP77 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SSU72Q9NP77 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.72□□□□□ -1.49
SSU72Q9NP77 GAPDHP42-201ENST00000406848 981 ntBASIC5.72□□□□□ -1.49
SSU72Q9NP77 RNA5SP198-201ENST00000410376 127 ntBASIC5.72□□□□□ -1.49
SSU72Q9NP77 VN1R36P-201ENST00000414936 291 ntBASIC5.72□□□□□ -1.49
SSU72Q9NP77 AC073136.2-201ENST00000417282 849 ntBASIC5.72□□□□□ -1.49
SSU72Q9NP77 AC013429.2-201ENST00000418798 781 ntBASIC5.72□□□□□ -1.49
SSU72Q9NP77 ELOCP4-201ENST00000420090 333 ntBASIC5.72□□□□□ -1.49
SSU72Q9NP77 SETP9-201ENST00000423837 832 ntBASIC5.72□□□□□ -1.49
SSU72Q9NP77 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC5.72□□□□□ -1.49
SSU72Q9NP77 OR2B7P-201ENST00000429302 934 ntBASIC5.72□□□□□ -1.49
SSU72Q9NP77 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SSU72Q9NP77 MTND6P18-201ENST00000439477 513 ntBASIC5.72□□□□□ -1.49
SSU72Q9NP77 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC5.72□□□□□ -1.49
SSU72Q9NP77 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.72□□□□□ -1.49
SSU72Q9NP77 AL035551.1-201ENST00000446931 348 ntBASIC5.72□□□□□ -1.49
SSU72Q9NP77 AC002381.1-201ENST00000447049 280 ntBASIC5.72□□□□□ -1.49
SSU72Q9NP77 SLAMF6P1-201ENST00000451067 602 ntBASIC5.72□□□□□ -1.49
SSU72Q9NP77 CACYBPP2-201ENST00000453625 678 ntBASIC5.72□□□□□ -1.49
SSU72Q9NP77 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC5.72□□□□□ -1.49
SSU72Q9NP77 RN7SL790P-201ENST00000474043 298 ntBASIC5.72□□□□□ -1.49
SSU72Q9NP77 AC092865.4-201ENST00000477936 615 ntBASIC5.72□□□□□ -1.49
SSU72Q9NP77 RPL7P42-201ENST00000481005 679 ntBASIC5.72□□□□□ -1.49
SSU72Q9NP77 RPL12P30-201ENST00000488389 499 ntBASIC5.72□□□□□ -1.49
SSU72Q9NP77 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.72□□□□□ -1.49
SSU72Q9NP77 RPS4XP18-201ENST00000495480 763 ntBASIC5.72□□□□□ -1.49
SSU72Q9NP77 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.72□□□□□ -1.49
SSU72Q9NP77 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC5.72□□□□□ -1.49
SSU72Q9NP77 RNU6-714P-201ENST00000516963 103 ntBASIC5.72□□□□□ -1.49
SSU72Q9NP77 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.72□□□□□ -1.49
SSU72Q9NP77 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC5.72□□□□□ -1.49
SSU72Q9NP77 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.72□□□□□ -1.49
SSU72Q9NP77 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms