Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 RNU6-729P-201ENST00000384399 107 ntBASIC3.13□□□□□ -1.91
KIAA1549Q9HCM3 HMGN2P8-201ENST00000391458 268 ntBASIC3.13□□□□□ -1.91
KIAA1549Q9HCM3 RSL24D1P1-201ENST00000404972 493 ntBASIC3.13□□□□□ -1.91
KIAA1549Q9HCM3 AL138878.1-201ENST00000405131 347 ntBASIC3.13□□□□□ -1.91
KIAA1549Q9HCM3 AC008280.1-201ENST00000418851 412 ntBASIC3.13□□□□□ -1.91
KIAA1549Q9HCM3 AC106901.1-201ENST00000425086 698 ntBASIC3.13□□□□□ -1.91
KIAA1549Q9HCM3 AC099063.2-201ENST00000446360 662 ntBASIC3.13□□□□□ -1.91
KIAA1549Q9HCM3 AC097262.1-201ENST00000452559 548 ntBASIC3.13□□□□□ -1.91
KIAA1549Q9HCM3 DSTNP2-201ENST00000504533 515 ntBASIC3.13□□□□□ -1.91
KIAA1549Q9HCM3 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.13□□□□□ -1.91
KIAA1549Q9HCM3 AC018442.3-201ENST00000523025 183 ntBASIC3.13□□□□□ -1.91
KIAA1549Q9HCM3 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.13□□□□□ -1.91
KIAA1549Q9HCM3 AC109635.6-201ENST00000525487 1113 ntBASIC3.13□□□□□ -1.91
KIAA1549Q9HCM3 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.13□□□□□ -1.91
KIAA1549Q9HCM3 AL163642.2-201ENST00000604722 1019 ntBASIC3.13□□□□□ -1.91
KIAA1549Q9HCM3 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.13□□□□□ -1.91
KIAA1549Q9HCM3 AP003355.3-201ENST00000623465 114 ntBASIC3.13□□□□□ -1.91
KIAA1549Q9HCM3 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.13□□□□□ -1.91
KIAA1549Q9HCM3 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
KIAA1549Q9HCM3 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
KIAA1549Q9HCM3 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
KIAA1549Q9HCM3 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.13□□□□□ -1.91
KIAA1549Q9HCM3 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.13□□□□□ -1.91
KIAA1549Q9HCM3 RLIMP2-201ENST00000427891 1563 ntBASIC3.13□□□□□ -1.91
KIAA1549Q9HCM3 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 RN7SKP111-201ENST00000410349 271 ntBASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 RPS15AP29-201ENST00000445539 400 ntBASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 RBMY2UP-201ENST00000453474 324 ntBASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 ANP32BP2-201ENST00000454525 545 ntBASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 AC106872.2-201ENST00000494303 480 ntBASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 MIR2114-201ENST00000516645 80 ntBASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 AC027281.1-201ENST00000574178 758 ntBASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 AC006116.10-201ENST00000591836 581 ntBASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 BNIP3P38-201ENST00000601117 544 ntBASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 AL160281.1-201ENST00000605307 311 ntBASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 AL732618.1-201ENST00000623251 301 ntBASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 AL365440.1-201ENST00000436135 2167 ntBASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 AC073346.2-201ENST00000624724 2058 ntBASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 ZNF833P-201ENST00000424938 1494 ntBASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 DDX6P1-205ENST00000441966 1436 ntBASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 RNA5SP50-201ENST00000363731 107 ntBASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 RNU1-89P-201ENST00000384592 164 ntBASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 CYCSP32-201ENST00000440548 321 ntBASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 ACTG1P13-201ENST00000486987 1043 ntBASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 CD24P2-201ENST00000565486 219 ntBASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 AL442067.2-201ENST00000614033 363 ntBASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 AL645937.1-201ENST00000641739 1652 ntBASIC3.12□□□□□ -1.91
KIAA1549Q9HCM3 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 BX323014.1-201ENST00000412876 237 ntBASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 MTND4P22-201ENST00000413116 1169 ntBASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 AL590609.2-201ENST00000421430 368 ntBASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 RPS26P40-201ENST00000435209 294 ntBASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 RPL26P28-201ENST00000451325 435 ntBASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 SNORD105B-201ENST00000458770 79 ntBASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 U3.44-201ENST00000458938 192 ntBASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 RN7SKP57-201ENST00000517248 293 ntBASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 MTCYBP19-201ENST00000517463 1124 ntBASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 AC092851.1-201ENST00000535964 478 ntBASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 AC012493.2-201ENST00000595083 291 ntBASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 AC138932.5-201ENST00000617759 563 ntBASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 AL732372.2-225ENST00000642124 456 ntBASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 AC032011.1-201ENST00000611703 1549 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms