Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC092447.7-201ENST00000422212 1621 ntBASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 AC103591.2-201ENST00000265259 766 ntBASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 RNU6-501P-201ENST00000364072 100 ntBASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 Y_RNA.516-201ENST00000384541 124 ntBASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 AC002524.1-201ENST00000411687 547 ntBASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 OR2B8P-201ENST00000432841 938 ntBASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 SLC31A1P1-201ENST00000451221 567 ntBASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 DNAJC19P1-201ENST00000455312 319 ntBASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 RPSAP50-201ENST00000481955 852 ntBASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 RN7SL727P-201ENST00000482164 296 ntBASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 RPL9P33-201ENST00000484311 566 ntBASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 AC024558.1-201ENST00000505008 528 ntBASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 MTCYBP43-201ENST00000513621 740 ntBASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 AC116347.2-201ENST00000514912 523 ntBASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 OR5G4P-201ENST00000525251 760 ntBASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 AP000676.2-201ENST00000529711 301 ntBASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 OR5D15P-201ENST00000531671 942 ntBASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 AC115085.1-201ENST00000588924 229 ntBASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 AC091805.2-201ENST00000603848 235 ntBASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 NDUFA8P1-201ENST00000605525 367 ntBASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 AC107214.2-201ENST00000608204 634 ntBASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 MIR8069-1-201ENST00000616627 86 ntBASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 MIR8069-2-201ENST00000621412 86 ntBASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 AC012414.7-202ENST00000622705 1090 ntBASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 AC093775.1-201ENST00000624154 1868 ntBASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 AC093849.1-201ENST00000563631 2209 ntBASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.76□□□□□ -1.65
AMBRA1Q9C0C7 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
AMBRA1Q9C0C7 PABPC1P9-201ENST00000426076 1612 ntBASIC4.75□□□□□ -1.65
AMBRA1Q9C0C7 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
AMBRA1Q9C0C7 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.75□□□□□ -1.65
AMBRA1Q9C0C7 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
AMBRA1Q9C0C7 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.75□□□□□ -1.65
AMBRA1Q9C0C7 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
AMBRA1Q9C0C7 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
AMBRA1Q9C0C7 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
AMBRA1Q9C0C7 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.75□□□□□ -1.65
AMBRA1Q9C0C7 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
AMBRA1Q9C0C7 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
AMBRA1Q9C0C7 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
AMBRA1Q9C0C7 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
AMBRA1Q9C0C7 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
AMBRA1Q9C0C7 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
AMBRA1Q9C0C7 Y_RNA.41-201ENST00000362646 102 ntBASIC4.75□□□□□ -1.65
AMBRA1Q9C0C7 RNU6-251P-201ENST00000363235 104 ntBASIC4.75□□□□□ -1.65
AMBRA1Q9C0C7 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
AMBRA1Q9C0C7 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
AMBRA1Q9C0C7 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.75□□□□□ -1.65
AMBRA1Q9C0C7 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.75□□□□□ -1.65
AMBRA1Q9C0C7 RPL21P108-201ENST00000413857 481 ntBASIC4.75□□□□□ -1.65
AMBRA1Q9C0C7 SLC35E1P1-201ENST00000419313 864 ntBASIC4.75□□□□□ -1.65
AMBRA1Q9C0C7 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.75□□□□□ -1.65
AMBRA1Q9C0C7 AC233981.1-201ENST00000423224 461 ntBASIC4.75□□□□□ -1.65
AMBRA1Q9C0C7 COX6CP13-201ENST00000428703 226 ntBASIC4.75□□□□□ -1.65
AMBRA1Q9C0C7 AC005033.1-201ENST00000428904 813 ntBASIC4.75□□□□□ -1.65
AMBRA1Q9C0C7 AL512649.1-201ENST00000428997 581 ntBASIC4.75□□□□□ -1.65
AMBRA1Q9C0C7 AL365184.2-201ENST00000431139 435 ntBASIC4.75□□□□□ -1.65
AMBRA1Q9C0C7 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
AMBRA1Q9C0C7 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.75□□□□□ -1.65
AMBRA1Q9C0C7 AC006466.1-201ENST00000438721 289 ntBASIC4.75□□□□□ -1.65
AMBRA1Q9C0C7 RPS29P10-201ENST00000439197 166 ntBASIC4.75□□□□□ -1.65
AMBRA1Q9C0C7 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.75□□□□□ -1.65
AMBRA1Q9C0C7 NPM1P39-201ENST00000449818 867 ntBASIC4.75□□□□□ -1.65
AMBRA1Q9C0C7 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.75□□□□□ -1.65
AMBRA1Q9C0C7 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.75□□□□□ -1.65
AMBRA1Q9C0C7 UBA52P3-201ENST00000491303 382 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 163.7 ms