Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM4Q9C037 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM4Q9C037 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM4Q9C037 OR13C3-201ENST00000374781 1108 ntBASIC3.87□□□□□ -1.79
TRIM4Q9C037 OR52E6-202ENST00000379946 954 ntBASIC3.87□□□□□ -1.79
TRIM4Q9C037 RN7SKP182-201ENST00000410772 298 ntBASIC3.87□□□□□ -1.79
TRIM4Q9C037 PGBD4P8-201ENST00000412993 562 ntBASIC3.87□□□□□ -1.79
TRIM4Q9C037 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM4Q9C037 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM4Q9C037 HMGN2P31-201ENST00000432430 273 ntBASIC3.87□□□□□ -1.79
TRIM4Q9C037 AC092809.1-201ENST00000441469 474 ntBASIC3.87□□□□□ -1.79
TRIM4Q9C037 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.87□□□□□ -1.79
TRIM4Q9C037 AC037198.2-201ENST00000478845 733 ntBASIC3.87□□□□□ -1.79
TRIM4Q9C037 AC110792.1-201ENST00000491826 472 ntBASIC3.87□□□□□ -1.79
TRIM4Q9C037 AL035404.1-201ENST00000497982 568 ntBASIC3.87□□□□□ -1.79
TRIM4Q9C037 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.87□□□□□ -1.79
TRIM4Q9C037 AC024224.1-201ENST00000538284 609 ntBASIC3.87□□□□□ -1.79
TRIM4Q9C037 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
TRIM4Q9C037 AC005255.1-201ENST00000593748 216 ntBASIC3.87□□□□□ -1.79
TRIM4Q9C037 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.87□□□□□ -1.79
TRIM4Q9C037 RMST_8.1-201ENST00000610287 165 ntBASIC3.87□□□□□ -1.79
TRIM4Q9C037 MIR7153-201ENST00000637758 57 ntBASIC3.87□□□□□ -1.79
TRIM4Q9C037 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
TRIM4Q9C037 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.87□□□□□ -1.79
TRIM4Q9C037 AC009229.4-201ENST00000623854 1947 ntBASIC3.87□□□□□ -1.79
TRIM4Q9C037 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM4Q9C037 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM4Q9C037 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM4Q9C037 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
TRIM4Q9C037 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM4Q9C037 AC090229.1-201ENST00000590983 1609 ntBASIC3.86□□□□□ -1.79
TRIM4Q9C037 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
TRIM4Q9C037 AC007390.1-201ENST00000415722 356 ntBASIC3.86□□□□□ -1.79
TRIM4Q9C037 AC002075.2-201ENST00000425207 252 ntBASIC3.86□□□□□ -1.79
TRIM4Q9C037 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.86□□□□□ -1.79
TRIM4Q9C037 AL358472.1-201ENST00000431295 329 ntBASIC3.86□□□□□ -1.79
TRIM4Q9C037 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.86□□□□□ -1.79
TRIM4Q9C037 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.86□□□□□ -1.79
TRIM4Q9C037 CYCSP43-201ENST00000438233 310 ntBASIC3.86□□□□□ -1.79
TRIM4Q9C037 MTCYBP31-201ENST00000438855 1122 ntBASIC3.86□□□□□ -1.79
TRIM4Q9C037 CASP3P1-201ENST00000446037 609 ntBASIC3.86□□□□□ -1.79
TRIM4Q9C037 PPIAP3-201ENST00000450588 505 ntBASIC3.86□□□□□ -1.79
TRIM4Q9C037 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM4Q9C037 RPL6P9-201ENST00000466502 859 ntBASIC3.86□□□□□ -1.79
TRIM4Q9C037 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC3.86□□□□□ -1.79
TRIM4Q9C037 AC022336.1-201ENST00000475510 337 ntBASIC3.86□□□□□ -1.79
TRIM4Q9C037 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.86□□□□□ -1.79
TRIM4Q9C037 CDH12P2-201ENST00000504393 298 ntBASIC3.86□□□□□ -1.79
TRIM4Q9C037 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM4Q9C037 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.86□□□□□ -1.79
TRIM4Q9C037 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.86□□□□□ -1.79
TRIM4Q9C037 GNRHR2P1-201ENST00000555315 631 ntBASIC3.86□□□□□ -1.79
TRIM4Q9C037 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.86□□□□□ -1.79
TRIM4Q9C037 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.86□□□□□ -1.79
TRIM4Q9C037 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.86□□□□□ -1.79
TRIM4Q9C037 MIR5195-201ENST00000583555 115 ntBASIC3.86□□□□□ -1.79
TRIM4Q9C037 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.86□□□□□ -1.79
TRIM4Q9C037 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.86□□□□□ -1.79
TRIM4Q9C037 AL365503.1-201ENST00000605247 905 ntBASIC3.86□□□□□ -1.79
TRIM4Q9C037 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.86□□□□□ -1.79
TRIM4Q9C037 AL354798.1-201ENST00000622505 329 ntBASIC3.86□□□□□ -1.79
TRIM4Q9C037 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.86□□□□□ -1.79
TRIM4Q9C037 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.86□□□□□ -1.79
TRIM4Q9C037 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
TRIM4Q9C037 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.86□□□□□ -1.79
TRIM4Q9C037 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM4Q9C037 SYT14P1-202ENST00000600441 1448 ntBASIC3.86□□□□□ -1.79
TRIM4Q9C037 MTCO1P12-201ENST00000414273 1543 ntBASIC3.85□□□□□ -1.79
TRIM4Q9C037 AC116667.1-201ENST00000604855 2072 ntBASIC3.85□□□□□ -1.79
TRIM4Q9C037 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM4Q9C037 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.85□□□□□ -1.79
TRIM4Q9C037 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM4Q9C037 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
TRIM4Q9C037 RNA5SP72-201ENST00000364442 117 ntBASIC3.85□□□□□ -1.79
TRIM4Q9C037 MTHFD2P2-201ENST00000407725 247 ntBASIC3.85□□□□□ -1.79
TRIM4Q9C037 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM4Q9C037 RPL31P12-201ENST00000422587 358 ntBASIC3.85□□□□□ -1.79
TRIM4Q9C037 NPM1P34-201ENST00000428821 893 ntBASIC3.85□□□□□ -1.79
TRIM4Q9C037 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM4Q9C037 AL353093.1-201ENST00000441292 436 ntBASIC3.85□□□□□ -1.79
TRIM4Q9C037 PRDX3P3-201ENST00000447765 522 ntBASIC3.85□□□□□ -1.79
TRIM4Q9C037 AC007967.1-201ENST00000455422 1159 ntBASIC3.85□□□□□ -1.79
TRIM4Q9C037 RPL36AP13-201ENST00000457490 317 ntBASIC3.85□□□□□ -1.79
TRIM4Q9C037 AC018635.1-201ENST00000468292 1030 ntBASIC3.85□□□□□ -1.79
TRIM4Q9C037 RPL23AP44-201ENST00000482216 473 ntBASIC3.85□□□□□ -1.79
TRIM4Q9C037 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM4Q9C037 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM4Q9C037 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.85□□□□□ -1.79
TRIM4Q9C037 PHBP14-201ENST00000512887 367 ntBASIC3.85□□□□□ -1.79
TRIM4Q9C037 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM4Q9C037 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM4Q9C037 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM4Q9C037 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM4Q9C037 AL121576.1-201ENST00000556055 276 ntBASIC3.85□□□□□ -1.79
TRIM4Q9C037 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.85□□□□□ -1.79
TRIM4Q9C037 RPL23AP87-202ENST00000573039 466 ntBASIC3.85□□□□□ -1.79
TRIM4Q9C037 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM4Q9C037 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM4Q9C037 AC123786.2-201ENST00000603459 275 ntBASIC3.85□□□□□ -1.79
TRIM4Q9C037 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms