Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 OR3A2-201ENST00000408891 1076 ntBASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 USP9YP27-201ENST00000418455 438 ntBASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 AC093155.2-201ENST00000420734 937 ntBASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 RPL34P3-201ENST00000421454 338 ntBASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 BRWD1P3-201ENST00000428816 390 ntBASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 RPL7AP49-201ENST00000429522 581 ntBASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 AC109583.1-201ENST00000432156 268 ntBASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 AL358934.1-201ENST00000432346 324 ntBASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 AL591438.1-201ENST00000433508 581 ntBASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 AC009961.2-201ENST00000435771 251 ntBASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 AC087312.1-201ENST00000471411 480 ntBASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 AL161747.1-201ENST00000480068 358 ntBASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 AC114786.4-201ENST00000508771 728 ntBASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 SCARNA15.1-201ENST00000516384 125 ntBASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 AP000859.1-201ENST00000525536 307 ntBASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 MTND1P35-201ENST00000526739 508 ntBASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 FAM92A1P1-201ENST00000528023 890 ntBASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 MIR3176-201ENST00000582210 90 ntBASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 AC103792.1-201ENST00000603591 919 ntBASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 AL589674.2-201ENST00000604304 337 ntBASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 AC010338.1-201ENST00000621823 717 ntBASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 ATE1-AS1-202ENST00000636460 506 ntBASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
FOXP3Q9BZS1 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 AC018809.2-201ENST00000602436 3823 ntBASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 RNU6-533P-201ENST00000384144 107 ntBASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 RNU6-1103P-201ENST00000384150 107 ntBASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 HMGB1P20-201ENST00000402555 677 ntBASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 AL356776.1-201ENST00000406574 447 ntBASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 RPS20P15-201ENST00000412792 311 ntBASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 OR2AT2P-201ENST00000413438 905 ntBASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 AL513174.1-201ENST00000423182 629 ntBASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 AC127526.2-201ENST00000426436 775 ntBASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 HSPD1P12-201ENST00000429127 1069 ntBASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 MTND5P14-201ENST00000441481 1267 ntBASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 TRGVB-201ENST00000453257 471 ntBASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 RPL38P1-201ENST00000460914 211 ntBASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 AL049874.2-201ENST00000492636 288 ntBASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 AC022447.3-201ENST00000506865 495 ntBASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 AC093809.1-201ENST00000509155 340 ntBASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 AC021678.3-201ENST00000517893 476 ntBASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 AF235103.2-201ENST00000525753 346 ntBASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 HMGN2P36-201ENST00000529541 409 ntBASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 AC013828.2-201ENST00000532487 235 ntBASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 AL359219.2-201ENST00000555184 348 ntBASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms