Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC091946.2-201ENST00000606105 291 ntBASIC5.27□□□□□ -1.57
HPS3Q969F9 AC131238.1-201ENST00000617135 328 ntBASIC5.27□□□□□ -1.57
HPS3Q969F9 AC015871.5-202ENST00000623252 701 ntBASIC5.27□□□□□ -1.57
HPS3Q969F9 AC091931.1-201ENST00000623488 728 ntBASIC5.27□□□□□ -1.57
HPS3Q969F9 AC120338.1-201ENST00000625074 1541 ntBASIC5.27□□□□□ -1.57
HPS3Q969F9 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.27□□□□□ -1.57
HPS3Q969F9 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HPS3Q969F9 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
HPS3Q969F9 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
HPS3Q969F9 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
HPS3Q969F9 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
HPS3Q969F9 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HPS3Q969F9 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HPS3Q969F9 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HPS3Q969F9 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
HPS3Q969F9 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HPS3Q969F9 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HPS3Q969F9 AL391994.1-201ENST00000254724 282 ntBASIC5.26□□□□□ -1.57
HPS3Q969F9 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.26□□□□□ -1.57
HPS3Q969F9 RNU6-553P-201ENST00000364047 96 ntBASIC5.26□□□□□ -1.57
HPS3Q969F9 SNORA4.1-201ENST00000364263 144 ntBASIC5.26□□□□□ -1.57
HPS3Q969F9 RNU6-1122P-201ENST00000384449 107 ntBASIC5.26□□□□□ -1.57
HPS3Q969F9 MIR506-201ENST00000384998 124 ntBASIC5.26□□□□□ -1.57
HPS3Q969F9 DSTNP4-201ENST00000399472 474 ntBASIC5.26□□□□□ -1.57
HPS3Q969F9 AC068533.2-201ENST00000411872 306 ntBASIC5.26□□□□□ -1.57
HPS3Q969F9 RPS15AP38-201ENST00000413110 372 ntBASIC5.26□□□□□ -1.57
HPS3Q969F9 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.26□□□□□ -1.57
HPS3Q969F9 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.26□□□□□ -1.57
HPS3Q969F9 RPL34P6-201ENST00000432390 345 ntBASIC5.26□□□□□ -1.57
HPS3Q969F9 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.26□□□□□ -1.57
HPS3Q969F9 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.26□□□□□ -1.57
HPS3Q969F9 HMGB3P9-201ENST00000441799 583 ntBASIC5.26□□□□□ -1.57
HPS3Q969F9 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.26□□□□□ -1.57
HPS3Q969F9 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HPS3Q969F9 AC079168.2-201ENST00000453977 416 ntBASIC5.26□□□□□ -1.57
HPS3Q969F9 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.26□□□□□ -1.57
HPS3Q969F9 AL591473.1-201ENST00000464297 313 ntBASIC5.26□□□□□ -1.57
HPS3Q969F9 AC010683.1-201ENST00000473673 378 ntBASIC5.26□□□□□ -1.57
HPS3Q969F9 NCOR1P1-202ENST00000486162 291 ntBASIC5.26□□□□□ -1.57
HPS3Q969F9 RPL7P38-201ENST00000488396 739 ntBASIC5.26□□□□□ -1.57
HPS3Q969F9 AC020890.1-201ENST00000491837 504 ntBASIC5.26□□□□□ -1.57
HPS3Q969F9 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC5.26□□□□□ -1.57
HPS3Q969F9 FTH1P24-201ENST00000503502 462 ntBASIC5.26□□□□□ -1.57
HPS3Q969F9 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.26□□□□□ -1.57
HPS3Q969F9 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC5.26□□□□□ -1.57
HPS3Q969F9 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.26□□□□□ -1.57
HPS3Q969F9 HMGB1P28-201ENST00000507778 552 ntBASIC5.26□□□□□ -1.57
HPS3Q969F9 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.26□□□□□ -1.57
HPS3Q969F9 ATP1B1P1-201ENST00000509767 915 ntBASIC5.26□□□□□ -1.57
HPS3Q969F9 OR7H2P-201ENST00000513483 306 ntBASIC5.26□□□□□ -1.57
HPS3Q969F9 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC5.26□□□□□ -1.57
HPS3Q969F9 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.26□□□□□ -1.57
HPS3Q969F9 SLC2A13P1-201ENST00000531560 322 ntBASIC5.26□□□□□ -1.57
HPS3Q969F9 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.26□□□□□ -1.57
HPS3Q969F9 EIF5A2P1-201ENST00000564027 460 ntBASIC5.26□□□□□ -1.57
HPS3Q969F9 AL512347.1-201ENST00000566420 503 ntBASIC5.26□□□□□ -1.57
HPS3Q969F9 AC135628.1-201ENST00000568867 534 ntBASIC5.26□□□□□ -1.57
HPS3Q969F9 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC5.26□□□□□ -1.57
HPS3Q969F9 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.26□□□□□ -1.57
HPS3Q969F9 IMMP1LP1-201ENST00000605170 488 ntBASIC5.26□□□□□ -1.57
HPS3Q969F9 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC5.26□□□□□ -1.57
HPS3Q969F9 AC100827.5-201ENST00000615883 426 ntBASIC5.26□□□□□ -1.57
HPS3Q969F9 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HPS3Q969F9 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HPS3Q969F9 CR381572.2-201ENST00000624852 397 ntBASIC5.26□□□□□ -1.57
HPS3Q969F9 AL451142.2-201ENST00000429076 2090 ntBASIC5.26□□□□□ -1.57
HPS3Q969F9 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
HPS3Q969F9 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HPS3Q969F9 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.26□□□□□ -1.57
HPS3Q969F9 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HPS3Q969F9 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
HPS3Q969F9 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
HPS3Q969F9 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HPS3Q969F9 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.25□□□□□ -1.57
HPS3Q969F9 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HPS3Q969F9 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HPS3Q969F9 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.25□□□□□ -1.57
HPS3Q969F9 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.25□□□□□ -1.57
HPS3Q969F9 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.25□□□□□ -1.57
HPS3Q969F9 RNU6-216P-201ENST00000363282 104 ntBASIC5.25□□□□□ -1.57
HPS3Q969F9 RNU1-83P-201ENST00000363426 164 ntBASIC5.25□□□□□ -1.57
HPS3Q969F9 RNU1-85P-201ENST00000364127 164 ntBASIC5.25□□□□□ -1.57
HPS3Q969F9 AL078604.1-201ENST00000404609 466 ntBASIC5.25□□□□□ -1.57
HPS3Q969F9 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.25□□□□□ -1.57
HPS3Q969F9 MOB4-205ENST00000409916 829 ntTSL 3 BASIC5.25□□□□□ -1.57
HPS3Q969F9 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.25□□□□□ -1.57
HPS3Q969F9 FABP7P2-201ENST00000429946 379 ntBASIC5.25□□□□□ -1.57
HPS3Q969F9 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.25□□□□□ -1.57
HPS3Q969F9 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC5.25□□□□□ -1.57
HPS3Q969F9 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC5.25□□□□□ -1.57
HPS3Q969F9 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.25□□□□□ -1.57
HPS3Q969F9 RPL30P6-201ENST00000475925 342 ntBASIC5.25□□□□□ -1.57
HPS3Q969F9 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.25□□□□□ -1.57
HPS3Q969F9 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.25□□□□□ -1.57
HPS3Q969F9 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.25□□□□□ -1.57
HPS3Q969F9 RNU6-759P-201ENST00000516740 103 ntBASIC5.25□□□□□ -1.57
HPS3Q969F9 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.25□□□□□ -1.57
HPS3Q969F9 CR383656.6-201ENST00000550518 394 ntBASIC5.25□□□□□ -1.57
HPS3Q969F9 AC074029.1-201ENST00000552531 1044 ntBASIC5.25□□□□□ -1.57
HPS3Q969F9 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms