Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
ERCC4Q92889 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
ERCC4Q92889 RN7SKP113-201ENST00000363891 295 ntBASIC5.59□□□□□ -1.51
ERCC4Q92889 Y_RNA.359-201ENST00000365498 102 ntBASIC5.59□□□□□ -1.51
ERCC4Q92889 Y_RNA.516-201ENST00000384541 124 ntBASIC5.59□□□□□ -1.51
ERCC4Q92889 SNORD116-23-201ENST00000384645 92 ntBASIC5.59□□□□□ -1.51
ERCC4Q92889 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ERCC4Q92889 AC136624.1-201ENST00000400791 413 ntBASIC5.59□□□□□ -1.51
ERCC4Q92889 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.59□□□□□ -1.51
ERCC4Q92889 AC022028.1-201ENST00000412054 408 ntBASIC5.59□□□□□ -1.51
ERCC4Q92889 USP9YP33-201ENST00000412220 421 ntBASIC5.59□□□□□ -1.51
ERCC4Q92889 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.59□□□□□ -1.51
ERCC4Q92889 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.59□□□□□ -1.51
ERCC4Q92889 AL355433.1-201ENST00000422804 300 ntBASIC5.59□□□□□ -1.51
ERCC4Q92889 AC007559.1-201ENST00000428736 355 ntBASIC5.59□□□□□ -1.51
ERCC4Q92889 SKP1P3-201ENST00000429280 487 ntBASIC5.59□□□□□ -1.51
ERCC4Q92889 OFD1P13Y-201ENST00000431179 1232 ntBASIC5.59□□□□□ -1.51
ERCC4Q92889 OR52B5P-201ENST00000435337 951 ntBASIC5.59□□□□□ -1.51
ERCC4Q92889 MTND6P18-201ENST00000439477 513 ntBASIC5.59□□□□□ -1.51
ERCC4Q92889 RPS29P9-201ENST00000440360 171 ntBASIC5.59□□□□□ -1.51
ERCC4Q92889 AL163193.1-201ENST00000444895 788 ntBASIC5.59□□□□□ -1.51
ERCC4Q92889 CFTRP1-201ENST00000456646 183 ntBASIC5.59□□□□□ -1.51
ERCC4Q92889 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.59□□□□□ -1.51
ERCC4Q92889 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC5.59□□□□□ -1.51
ERCC4Q92889 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.59□□□□□ -1.51
ERCC4Q92889 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.59□□□□□ -1.51
ERCC4Q92889 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ERCC4Q92889 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.59□□□□□ -1.51
ERCC4Q92889 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.59□□□□□ -1.51
ERCC4Q92889 AL139174.1-201ENST00000531489 886 ntBASIC5.59□□□□□ -1.51
ERCC4Q92889 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.59□□□□□ -1.51
ERCC4Q92889 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.59□□□□□ -1.51
ERCC4Q92889 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.59□□□□□ -1.51
ERCC4Q92889 AC020914.6-201ENST00000594327 272 ntBASIC5.59□□□□□ -1.51
ERCC4Q92889 AC083899.3-201ENST00000603413 594 ntBASIC5.59□□□□□ -1.51
ERCC4Q92889 AC105254.2-201ENST00000603636 436 ntBASIC5.59□□□□□ -1.51
ERCC4Q92889 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.59□□□□□ -1.51
ERCC4Q92889 AC005332.6-201ENST00000613178 446 ntBASIC5.59□□□□□ -1.51
ERCC4Q92889 AC116165.2-201ENST00000616705 206 ntBASIC5.59□□□□□ -1.51
ERCC4Q92889 AC234782.5-201ENST00000617723 324 ntBASIC5.59□□□□□ -1.51
ERCC4Q92889 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.59□□□□□ -1.51
ERCC4Q92889 OR52B5P-202ENST00000641118 1110 ntBASIC5.59□□□□□ -1.51
ERCC4Q92889 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.59□□□□□ -1.51
ERCC4Q92889 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ERCC4Q92889 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.59□□□□□ -1.51
ERCC4Q92889 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.59□□□□□ -1.52
ERCC4Q92889 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
ERCC4Q92889 AC107068.1-201ENST00000563286 4218 ntBASIC5.59□□□□□ -1.52
ERCC4Q92889 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
ERCC4Q92889 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
ERCC4Q92889 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
ERCC4Q92889 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ERCC4Q92889 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ERCC4Q92889 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
ERCC4Q92889 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ERCC4Q92889 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.58□□□□□ -1.52
ERCC4Q92889 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ERCC4Q92889 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ERCC4Q92889 Y_RNA.41-201ENST00000362646 102 ntBASIC5.58□□□□□ -1.52
ERCC4Q92889 RNU6-1066P-201ENST00000363573 105 ntBASIC5.58□□□□□ -1.52
ERCC4Q92889 Y_RNA.302-201ENST00000364997 102 ntBASIC5.58□□□□□ -1.52
ERCC4Q92889 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.58□□□□□ -1.52
ERCC4Q92889 RPL23AP47-201ENST00000408017 460 ntBASIC5.58□□□□□ -1.52
ERCC4Q92889 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
ERCC4Q92889 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.58□□□□□ -1.52
ERCC4Q92889 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC5.58□□□□□ -1.52
ERCC4Q92889 RPS24P8-201ENST00000431490 402 ntBASIC5.58□□□□□ -1.52
ERCC4Q92889 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.58□□□□□ -1.52
ERCC4Q92889 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC5.58□□□□□ -1.52
ERCC4Q92889 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC5.58□□□□□ -1.52
ERCC4Q92889 TPTE2P6-202ENST00000445572 1007 ntBASIC5.58□□□□□ -1.52
ERCC4Q92889 NPM1P39-201ENST00000449818 867 ntBASIC5.58□□□□□ -1.52
ERCC4Q92889 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC5.58□□□□□ -1.52
ERCC4Q92889 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ERCC4Q92889 SNRPGP9-201ENST00000456025 225 ntBASIC5.58□□□□□ -1.52
ERCC4Q92889 CYCSP34-201ENST00000458172 304 ntBASIC5.58□□□□□ -1.52
ERCC4Q92889 TPT1P7-201ENST00000458300 517 ntBASIC5.58□□□□□ -1.52
ERCC4Q92889 RNA5SP269-201ENST00000459032 137 ntBASIC5.58□□□□□ -1.52
ERCC4Q92889 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.58□□□□□ -1.52
ERCC4Q92889 AC024558.1-201ENST00000505008 528 ntBASIC5.58□□□□□ -1.52
ERCC4Q92889 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC5.58□□□□□ -1.52
ERCC4Q92889 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.58□□□□□ -1.52
ERCC4Q92889 AC108471.1-201ENST00000513977 287 ntBASIC5.58□□□□□ -1.52
ERCC4Q92889 RNU6-885P-201ENST00000516607 104 ntBASIC5.58□□□□□ -1.52
ERCC4Q92889 RNU6-405P-201ENST00000516637 110 ntBASIC5.58□□□□□ -1.52
ERCC4Q92889 snoU109.6-201ENST00000516831 118 ntBASIC5.58□□□□□ -1.52
ERCC4Q92889 IGLV2-28-201ENST00000520681 304 ntBASIC5.58□□□□□ -1.52
ERCC4Q92889 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.58□□□□□ -1.52
ERCC4Q92889 OR5G4P-201ENST00000525251 760 ntBASIC5.58□□□□□ -1.52
ERCC4Q92889 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.58□□□□□ -1.52
ERCC4Q92889 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.58□□□□□ -1.52
ERCC4Q92889 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.58□□□□□ -1.52
ERCC4Q92889 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.58□□□□□ -1.52
ERCC4Q92889 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.58□□□□□ -1.52
ERCC4Q92889 AC090751.1-201ENST00000566966 267 ntBASIC5.58□□□□□ -1.52
ERCC4Q92889 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.58□□□□□ -1.52
ERCC4Q92889 AC012360.2-201ENST00000609349 391 ntBASIC5.58□□□□□ -1.52
ERCC4Q92889 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.58□□□□□ -1.52
ERCC4Q92889 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.58□□□□□ -1.52
ERCC4Q92889 MIR8069-1-201ENST00000616627 86 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms