Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 AC005191.1-201ENST00000603950 358 ntBASIC3.19□□□□□ -1.9
AP3S1Q92572 AL365400.2-201ENST00000605604 902 ntBASIC3.19□□□□□ -1.9
AP3S1Q92572 MIR8059-201ENST00000620427 81 ntBASIC3.19□□□□□ -1.9
AP3S1Q92572 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.19□□□□□ -1.9
AP3S1Q92572 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.19□□□□□ -1.9
AP3S1Q92572 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.19□□□□□ -1.9
AP3S1Q92572 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.19□□□□□ -1.9
AP3S1Q92572 LARP1BP1-201ENST00000506036 1359 ntBASIC3.19□□□□□ -1.9
AP3S1Q92572 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.19□□□□□ -1.9
AP3S1Q92572 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
AP3S1Q92572 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
AP3S1Q92572 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
AP3S1Q92572 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.19□□□□□ -1.9
AP3S1Q92572 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
AP3S1Q92572 AL079305.1-201ENST00000623159 3008 ntBASIC3.18□□□□□ -1.9
AP3S1Q92572 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
AP3S1Q92572 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
AP3S1Q92572 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.18□□□□□ -1.9
AP3S1Q92572 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC3.18□□□□□ -1.9
AP3S1Q92572 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
AP3S1Q92572 U3.39-201ENST00000408569 239 ntBASIC3.18□□□□□ -1.9
AP3S1Q92572 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.18□□□□□ -1.9
AP3S1Q92572 AC016397.1-201ENST00000412463 242 ntBASIC3.18□□□□□ -1.9
AP3S1Q92572 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.18□□□□□ -1.9
AP3S1Q92572 AC126124.2-201ENST00000413542 321 ntBASIC3.18□□□□□ -1.9
AP3S1Q92572 BX890604.2-201ENST00000427883 474 ntBASIC3.18□□□□□ -1.9
AP3S1Q92572 AC068287.1-201ENST00000430283 295 ntBASIC3.18□□□□□ -1.9
AP3S1Q92572 AL031663.1-201ENST00000437445 219 ntBASIC3.18□□□□□ -1.9
AP3S1Q92572 FTH1P1-201ENST00000437933 532 ntBASIC3.18□□□□□ -1.9
AP3S1Q92572 HMGB1P12-201ENST00000438594 598 ntBASIC3.18□□□□□ -1.9
AP3S1Q92572 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.18□□□□□ -1.9
AP3S1Q92572 AC073264.2-201ENST00000448886 166 ntBASIC3.18□□□□□ -1.9
AP3S1Q92572 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
AP3S1Q92572 OR9M1P-201ENST00000459641 921 ntBASIC3.18□□□□□ -1.9
AP3S1Q92572 AC021205.2-201ENST00000480069 347 ntBASIC3.18□□□□□ -1.9
AP3S1Q92572 AP000563.1-201ENST00000490865 758 ntBASIC3.18□□□□□ -1.9
AP3S1Q92572 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
AP3S1Q92572 AC114967.1-201ENST00000504890 259 ntBASIC3.18□□□□□ -1.9
AP3S1Q92572 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.18□□□□□ -1.9
AP3S1Q92572 SNORA70.19-201ENST00000516717 90 ntBASIC3.18□□□□□ -1.9
AP3S1Q92572 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.18□□□□□ -1.9
AP3S1Q92572 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.18□□□□□ -1.9
AP3S1Q92572 AC068657.1-201ENST00000520807 306 ntBASIC3.18□□□□□ -1.9
AP3S1Q92572 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC3.18□□□□□ -1.9
AP3S1Q92572 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
AP3S1Q92572 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.18□□□□□ -1.9
AP3S1Q92572 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.18□□□□□ -1.9
AP3S1Q92572 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.18□□□□□ -1.9
AP3S1Q92572 UBE2NP1-201ENST00000545592 458 ntBASIC3.18□□□□□ -1.9
AP3S1Q92572 SYF2P1-201ENST00000550658 413 ntBASIC3.18□□□□□ -1.9
AP3S1Q92572 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC3.18□□□□□ -1.9
AP3S1Q92572 CENPUP2-201ENST00000555897 1186 ntBASIC3.18□□□□□ -1.9
AP3S1Q92572 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.18□□□□□ -1.9
AP3S1Q92572 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.18□□□□□ -1.9
AP3S1Q92572 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.18□□□□□ -1.9
AP3S1Q92572 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC3.18□□□□□ -1.9
AP3S1Q92572 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
AP3S1Q92572 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.18□□□□□ -1.9
AP3S1Q92572 AC020915.5-201ENST00000596836 964 ntBASIC3.18□□□□□ -1.9
AP3S1Q92572 AC133644.2-201ENST00000608142 540 ntBASIC3.18□□□□□ -1.9
AP3S1Q92572 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.18□□□□□ -1.9
AP3S1Q92572 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.18□□□□□ -1.9
AP3S1Q92572 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
AP3S1Q92572 CASC19-261ENST00000641853 1638 ntBASIC3.18□□□□□ -1.9
AP3S1Q92572 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
AP3S1Q92572 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
AP3S1Q92572 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
AP3S1Q92572 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.17□□□□□ -1.9
AP3S1Q92572 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
AP3S1Q92572 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
AP3S1Q92572 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
AP3S1Q92572 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
AP3S1Q92572 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
AP3S1Q92572 RPL23AP47-201ENST00000408017 460 ntBASIC3.17□□□□□ -1.9
AP3S1Q92572 RN7SKP33-201ENST00000410942 340 ntBASIC3.17□□□□□ -1.9
AP3S1Q92572 RNA5SP498-201ENST00000411342 120 ntBASIC3.17□□□□□ -1.9
AP3S1Q92572 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.17□□□□□ -1.9
AP3S1Q92572 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.17□□□□□ -1.9
AP3S1Q92572 GTF2IP23-201ENST00000423746 351 ntBASIC3.17□□□□□ -1.9
AP3S1Q92572 RPL23AP38-201ENST00000423801 469 ntBASIC3.17□□□□□ -1.9
AP3S1Q92572 AC006994.1-201ENST00000438212 839 ntBASIC3.17□□□□□ -1.9
AP3S1Q92572 AL513533.1-201ENST00000453728 415 ntBASIC3.17□□□□□ -1.9
AP3S1Q92572 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.17□□□□□ -1.9
AP3S1Q92572 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
AP3S1Q92572 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
AP3S1Q92572 AC041039.1-201ENST00000485656 536 ntBASIC3.17□□□□□ -1.9
AP3S1Q92572 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.17□□□□□ -1.9
AP3S1Q92572 AC110792.1-201ENST00000491826 472 ntBASIC3.17□□□□□ -1.9
AP3S1Q92572 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.17□□□□□ -1.9
AP3S1Q92572 RN7SKP92-201ENST00000517266 244 ntBASIC3.17□□□□□ -1.9
AP3S1Q92572 AC107934.2-201ENST00000518653 310 ntBASIC3.17□□□□□ -1.9
AP3S1Q92572 OR7E13P-201ENST00000526052 910 ntBASIC3.17□□□□□ -1.9
AP3S1Q92572 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC3.17□□□□□ -1.9
AP3S1Q92572 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.17□□□□□ -1.9
AP3S1Q92572 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
AP3S1Q92572 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.17□□□□□ -1.9
AP3S1Q92572 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.17□□□□□ -1.9
AP3S1Q92572 OR6C73P-201ENST00000546432 358 ntBASIC3.17□□□□□ -1.9
AP3S1Q92572 DUXAP6-201ENST00000553858 601 ntBASIC3.17□□□□□ -1.9
AP3S1Q92572 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms