Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 RBM6-203ENST00000421682 684 ntTSL 2 BASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 TRAPPC2P4-201ENST00000421750 331 ntBASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 GTF2IP23-201ENST00000423746 351 ntBASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 FGF12-202ENST00000430714 603 ntTSL 2 BASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 RPL23AP19-201ENST00000436229 369 ntBASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 AL590399.6-201ENST00000446396 307 ntBASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 RPL23AP20-201ENST00000447965 421 ntBASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 CYCSP35-201ENST00000451978 304 ntBASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 AC091564.1-201ENST00000464563 479 ntBASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 HMGB1P25-201ENST00000468402 607 ntBASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 RN7SL459P-201ENST00000481078 302 ntBASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 NAT2-202ENST00000520116 716 ntTSL 3 BASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 AC008489.1-201ENST00000524271 483 ntBASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 SS18L2P2-201ENST00000583960 235 ntBASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 AC005479.3-201ENST00000602790 431 ntBASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 AC087763.1-201ENST00000603391 286 ntBASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 AC098935.2-201ENST00000604222 466 ntBASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 AC113403.1-201ENST00000604910 193 ntBASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 AL392112.1-201ENST00000605115 829 ntBASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 AC107871.2-201ENST00000612894 502 ntBASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 AC127024.6-201ENST00000621598 424 ntBASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 AF117829.1-206ENST00000621883 3802 ntBASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 CCT5-215ENST00000625723 135 ntTSL 5 BASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 CDRT1-208ENST00000630868 794 ntBASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SPTSSBQ8NFR3 AP001350.1-201ENST00000601906 1524 ntBASIC1.96□□□□□ -2.09
SPTSSBQ8NFR3 AL353743.1-202ENST00000431724 1695 ntBASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 AC006042.3-201ENST00000454684 1469 ntBASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 RN7SKP95-201ENST00000362860 303 ntBASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 SNORA14A-201ENST00000364773 135 ntBASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 RNU1-109P-201ENST00000383960 147 ntBASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 RNA5SP397-201ENST00000391323 118 ntBASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 MIR1286-201ENST00000408112 78 ntBASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 RNU2-21P-201ENST00000410368 188 ntBASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 RSU1P3-201ENST00000412878 835 ntBASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 AC093162.1-201ENST00000419682 124 ntBASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 AC002069.1-201ENST00000429649 1159 ntBASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 MOB1AP1-201ENST00000430903 535 ntBASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 AC005154.2-201ENST00000438110 379 ntBASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 RPL39P40-201ENST00000445481 146 ntBASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 RNF148-202ENST00000447240 839 ntTSL 2 BASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 FCF1P7-201ENST00000451185 558 ntBASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 SUN3-208ENST00000453192 801 ntTSL 5 BASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 AC020893.1-201ENST00000502452 580 ntBASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 HMGB1P22-201ENST00000505315 124 ntBASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 CDV3-208ENST00000511392 554 ntTSL 5 BASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 MTCO2P32-201ENST00000514865 403 ntBASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 HAUS8P1-201ENST00000549005 542 ntBASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 AC091516.1-201ENST00000549191 703 ntBASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 AC105129.1-201ENST00000560250 297 ntBASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 MIR5684-201ENST00000585074 65 ntBASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 AC006116.3-201ENST00000592968 361 ntBASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 BNIP3P38-201ENST00000601117 544 ntBASIC1.96□□□□□ -2.1
SPTSSBQ8NFR3 AC091057.2-201ENST00000602594 792 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms