Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 RN7SL93P-201ENST00000463035 293 ntBASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 AL049830.2-201ENST00000480072 201 ntBASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 AC016550.3-201ENST00000515706 767 ntBASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 SNORA48.9-201ENST00000516419 162 ntBASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 RN7SKP21-201ENST00000516503 220 ntBASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 SCARNA14-201ENST00000516903 136 ntBASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 OR4V1P-201ENST00000525394 1140 ntBASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 AC067805.1-201ENST00000559344 470 ntBASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 AL133457.1-201ENST00000564251 987 ntBASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 RN7SL703P-201ENST00000578485 302 ntBASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 AC022916.3-201ENST00000592961 742 ntBASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 AC079791.1-201ENST00000605356 973 ntBASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 AC084036.1-201ENST00000609190 508 ntBASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 AC090912.3-201ENST00000609775 533 ntBASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 AC016717.3-201ENST00000624730 554 ntBASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 RPS4XP5-202ENST00000449995 1334 ntBASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 AP004289.2-201ENST00000444413 1457 ntBASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 TNPO1P3-201ENST00000436471 2662 ntBASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 MIR124-3-201ENST00000384866 87 ntBASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 MIR92A2-201ENST00000385299 75 ntBASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 MIR320B1-201ENST00000390209 79 ntBASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 ATP5F1P4-201ENST00000397288 746 ntBASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 RN7SKP263-201ENST00000411194 309 ntBASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 AL591419.1-201ENST00000427423 339 ntBASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 ARF4P2-201ENST00000430209 526 ntBASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 USP9YP31-201ENST00000431405 881 ntBASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 MTCO3P20-201ENST00000454926 688 ntBASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 AC078785.3-201ENST00000476607 425 ntBASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 PRELID3BP5-201ENST00000508612 460 ntBASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 AL121766.1-201ENST00000547436 487 ntBASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 MIR3160-1-201ENST00000577972 85 ntBASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 AL163642.2-201ENST00000604722 1019 ntBASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 LINC00216-201ENST00000623548 1126 ntBASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 AC000367.1-201ENST00000452711 1766 ntBASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 AC024560.2-201ENST00000507981 1497 ntBASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC65Q8IXS2 USP8P1-201ENST00000494673 3183 ntBASIC4.15□□□□□ -1.74
CCDC65Q8IXS2 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CCDC65Q8IXS2 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CCDC65Q8IXS2 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CCDC65Q8IXS2 RNU1-18P-201ENST00000363062 164 ntBASIC4.15□□□□□ -1.75
CCDC65Q8IXS2 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC65Q8IXS2 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC65Q8IXS2 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CCDC65Q8IXS2 AC009237.5-201ENST00000414271 501 ntBASIC4.15□□□□□ -1.75
CCDC65Q8IXS2 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.15□□□□□ -1.75
CCDC65Q8IXS2 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC65Q8IXS2 RPL21P109-201ENST00000422213 475 ntBASIC4.15□□□□□ -1.75
CCDC65Q8IXS2 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC65Q8IXS2 RPS26P40-201ENST00000435209 294 ntBASIC4.15□□□□□ -1.75
CCDC65Q8IXS2 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC65Q8IXS2 AC245517.2-201ENST00000442890 346 ntBASIC4.15□□□□□ -1.75
CCDC65Q8IXS2 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC65Q8IXS2 AP002345.1-201ENST00000456493 928 ntBASIC4.15□□□□□ -1.75
CCDC65Q8IXS2 CFTRP1-201ENST00000456646 183 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms