Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AL357075.1-201ENST00000404107 726 ntBASIC2.32□□□□□ -2.04
CSMD3Q7Z407 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CSMD3Q7Z407 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC2.32□□□□□ -2.04
CSMD3Q7Z407 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC2.32□□□□□ -2.04
CSMD3Q7Z407 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC2.32□□□□□ -2.04
CSMD3Q7Z407 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC2.32□□□□□ -2.04
CSMD3Q7Z407 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC2.32□□□□□ -2.04
CSMD3Q7Z407 AC128713.1-201ENST00000471495 306 ntBASIC2.32□□□□□ -2.04
CSMD3Q7Z407 NPM1P17-201ENST00000479221 602 ntBASIC2.32□□□□□ -2.04
CSMD3Q7Z407 FAM172BP-201ENST00000487497 1089 ntBASIC2.32□□□□□ -2.04
CSMD3Q7Z407 HMGB3P13-201ENST00000511263 607 ntBASIC2.32□□□□□ -2.04
CSMD3Q7Z407 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC2.32□□□□□ -2.04
CSMD3Q7Z407 MIR4524B-201ENST00000581569 115 ntBASIC2.32□□□□□ -2.04
CSMD3Q7Z407 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.32□□□□□ -2.04
CSMD3Q7Z407 AC231759.1-201ENST00000616455 597 ntBASIC2.32□□□□□ -2.04
CSMD3Q7Z407 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.32□□□□□ -2.04
CSMD3Q7Z407 YES1-203ENST00000577961 4554 ntTSL 5 BASIC2.32□□□□□ -2.04
CSMD3Q7Z407 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CSMD3Q7Z407 AC068647.1-201ENST00000489539 2265 ntBASIC2.32□□□□□ -2.04
CSMD3Q7Z407 NAMPTP1-201ENST00000440465 2514 ntBASIC2.32□□□□□ -2.04
CSMD3Q7Z407 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC2.32□□□□□ -2.04
CSMD3Q7Z407 AC132942.1-201ENST00000486753 483 ntBASIC2.32□□□□□ -2.04
CSMD3Q7Z407 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC2.32□□□□□ -2.04
CSMD3Q7Z407 YWHAEP4-201ENST00000505390 198 ntBASIC2.32□□□□□ -2.04
CSMD3Q7Z407 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC2.32□□□□□ -2.04
CSMD3Q7Z407 SUMO2P20-201ENST00000520803 283 ntBASIC2.32□□□□□ -2.04
CSMD3Q7Z407 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.32□□□□□ -2.04
CSMD3Q7Z407 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC2.32□□□□□ -2.04
CSMD3Q7Z407 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
CSMD3Q7Z407 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
CSMD3Q7Z407 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
CSMD3Q7Z407 AC009313.2-201ENST00000417893 1941 ntBASIC2.32□□□□□ -2.04
CSMD3Q7Z407 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.32□□□□□ -2.04
CSMD3Q7Z407 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CSMD3Q7Z407 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
CSMD3Q7Z407 AC005189.1-201ENST00000431286 310 ntBASIC2.32□□□□□ -2.04
CSMD3Q7Z407 MAPRE1P3-201ENST00000435438 796 ntBASIC2.32□□□□□ -2.04
CSMD3Q7Z407 RPL7P36-201ENST00000444633 681 ntBASIC2.32□□□□□ -2.04
CSMD3Q7Z407 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC2.32□□□□□ -2.04
CSMD3Q7Z407 AC010655.1-201ENST00000449336 292 ntBASIC2.32□□□□□ -2.04
CSMD3Q7Z407 HMGN2P7-201ENST00000456186 273 ntBASIC2.32□□□□□ -2.04
CSMD3Q7Z407 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC2.32□□□□□ -2.04
CSMD3Q7Z407 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.32□□□□□ -2.04
CSMD3Q7Z407 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.32□□□□□ -2.04
CSMD3Q7Z407 DUXAP6-201ENST00000553858 601 ntBASIC2.32□□□□□ -2.04
CSMD3Q7Z407 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.32□□□□□ -2.04
CSMD3Q7Z407 SNORD91B-202ENST00000608459 222 ntBASIC2.32□□□□□ -2.04
CSMD3Q7Z407 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.32□□□□□ -2.04
CSMD3Q7Z407 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.32□□□□□ -2.04
CSMD3Q7Z407 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CSMD3Q7Z407 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CSMD3Q7Z407 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
CSMD3Q7Z407 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CSMD3Q7Z407 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
CSMD3Q7Z407 SEPT7P8-201ENST00000413308 775 ntBASIC2.31□□□□□ -2.04
CSMD3Q7Z407 HMGB1P18-201ENST00000438801 619 ntBASIC2.31□□□□□ -2.04
CSMD3Q7Z407 RPS29P31-201ENST00000446147 164 ntBASIC2.31□□□□□ -2.04
CSMD3Q7Z407 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC2.31□□□□□ -2.04
CSMD3Q7Z407 ARL4AP1-201ENST00000503220 705 ntBASIC2.31□□□□□ -2.04
CSMD3Q7Z407 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC2.31□□□□□ -2.04
CSMD3Q7Z407 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC2.31□□□□□ -2.04
CSMD3Q7Z407 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC2.31□□□□□ -2.04
CSMD3Q7Z407 AL672296.1-201ENST00000427780 2158 ntBASIC2.31□□□□□ -2.04
CSMD3Q7Z407 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.31□□□□□ -2.04
CSMD3Q7Z407 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.31□□□□□ -2.04
CSMD3Q7Z407 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.31□□□□□ -2.04
CSMD3Q7Z407 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC2.31□□□□□ -2.04
CSMD3Q7Z407 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC2.31□□□□□ -2.04
CSMD3Q7Z407 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
CSMD3Q7Z407 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC2.31□□□□□ -2.04
CSMD3Q7Z407 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC2.31□□□□□ -2.04
CSMD3Q7Z407 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CSMD3Q7Z407 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC2.31□□□□□ -2.04
CSMD3Q7Z407 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CSMD3Q7Z407 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CSMD3Q7Z407 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CSMD3Q7Z407 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CSMD3Q7Z407 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CSMD3Q7Z407 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CSMD3Q7Z407 RNA5SP103-201ENST00000459503 118 ntBASIC2.31□□□□□ -2.04
CSMD3Q7Z407 RN7SL585P-201ENST00000470538 280 ntBASIC2.31□□□□□ -2.04
CSMD3Q7Z407 AC023598.1-201ENST00000472521 361 ntBASIC2.31□□□□□ -2.04
CSMD3Q7Z407 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CSMD3Q7Z407 RPL7P47-201ENST00000497299 556 ntBASIC2.31□□□□□ -2.04
CSMD3Q7Z407 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC2.31□□□□□ -2.04
CSMD3Q7Z407 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC2.31□□□□□ -2.04
CSMD3Q7Z407 CYP4A43P-201ENST00000568156 121 ntBASIC2.31□□□□□ -2.04
CSMD3Q7Z407 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.31□□□□□ -2.04
CSMD3Q7Z407 AC004832.5-201ENST00000608677 401 ntBASIC2.31□□□□□ -2.04
CSMD3Q7Z407 AC087241.4-201ENST00000612441 480 ntBASIC2.31□□□□□ -2.04
CSMD3Q7Z407 AL162574.2-201ENST00000614618 657 ntBASIC2.31□□□□□ -2.04
CSMD3Q7Z407 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC2.31□□□□□ -2.04
CSMD3Q7Z407 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
CSMD3Q7Z407 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC2.31□□□□□ -2.04
CSMD3Q7Z407 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CSMD3Q7Z407 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CSMD3Q7Z407 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CSMD3Q7Z407 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
CSMD3Q7Z407 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CSMD3Q7Z407 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms