Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC38Q502W7 AC093414.1-201ENST00000434712 514 ntBASIC4.89□□□□□ -1.63
CCDC38Q502W7 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC38Q502W7 Z77249.1-201ENST00000444622 1175 ntBASIC4.89□□□□□ -1.63
CCDC38Q502W7 AC104651.2-201ENST00000447549 528 ntBASIC4.89□□□□□ -1.63
CCDC38Q502W7 MTCO1P48-201ENST00000448024 1096 ntBASIC4.89□□□□□ -1.63
CCDC38Q502W7 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC38Q502W7 RPL37P6-202ENST00000464216 403 ntBASIC4.89□□□□□ -1.63
CCDC38Q502W7 RPS6P4-201ENST00000494693 758 ntBASIC4.89□□□□□ -1.63
CCDC38Q502W7 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC38Q502W7 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC38Q502W7 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.89□□□□□ -1.63
CCDC38Q502W7 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC38Q502W7 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC38Q502W7 AC016065.2-201ENST00000514530 444 ntBASIC4.89□□□□□ -1.63
CCDC38Q502W7 RNA5SP154-201ENST00000516193 111 ntBASIC4.89□□□□□ -1.63
CCDC38Q502W7 RN7SKP277-201ENST00000516895 283 ntBASIC4.89□□□□□ -1.63
CCDC38Q502W7 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.89□□□□□ -1.63
CCDC38Q502W7 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC38Q502W7 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC4.89□□□□□ -1.63
CCDC38Q502W7 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CCDC38Q502W7 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC38Q502W7 RN7SL802P-201ENST00000577858 299 ntBASIC4.89□□□□□ -1.63
CCDC38Q502W7 OR4K7P-201ENST00000580232 945 ntBASIC4.89□□□□□ -1.63
CCDC38Q502W7 AC107982.3-201ENST00000584957 985 ntBASIC4.89□□□□□ -1.63
CCDC38Q502W7 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.89□□□□□ -1.63
CCDC38Q502W7 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC38Q502W7 AC009220.3-201ENST00000604318 586 ntBASIC4.89□□□□□ -1.63
CCDC38Q502W7 AC115621.1-201ENST00000604653 858 ntBASIC4.89□□□□□ -1.63
CCDC38Q502W7 AL445222.1-201ENST00000607259 628 ntBASIC4.89□□□□□ -1.63
CCDC38Q502W7 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC38Q502W7 AC121761.2-201ENST00000617300 689 ntBASIC4.89□□□□□ -1.63
CCDC38Q502W7 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.89□□□□□ -1.63
CCDC38Q502W7 RMST_9.1-201ENST00000619945 193 ntBASIC4.89□□□□□ -1.63
CCDC38Q502W7 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC38Q502W7 AP006248.2-201ENST00000623309 592 ntBASIC4.89□□□□□ -1.63
CCDC38Q502W7 MIR4278-201ENST00000636094 69 ntBASIC4.89□□□□□ -1.63
CCDC38Q502W7 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC38Q502W7 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC38Q502W7 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC38Q502W7 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC38Q502W7 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC38Q502W7 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC38Q502W7 AL133243.3-201ENST00000617415 3004 ntBASIC4.89□□□□□ -1.63
CCDC38Q502W7 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC38Q502W7 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CCDC38Q502W7 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC38Q502W7 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC38Q502W7 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC38Q502W7 RN7SKP95-201ENST00000362860 303 ntBASIC4.88□□□□□ -1.63
CCDC38Q502W7 RNU6-1226P-201ENST00000384317 107 ntBASIC4.88□□□□□ -1.63
CCDC38Q502W7 ENSAP1-201ENST00000392855 326 ntBASIC4.88□□□□□ -1.63
CCDC38Q502W7 TAF9BP1-201ENST00000396646 746 ntBASIC4.88□□□□□ -1.63
CCDC38Q502W7 ARL4AP5-201ENST00000404372 599 ntBASIC4.88□□□□□ -1.63
CCDC38Q502W7 AL133384.1-201ENST00000412744 351 ntBASIC4.88□□□□□ -1.63
CCDC38Q502W7 MTND2P16-201ENST00000419987 799 ntBASIC4.88□□□□□ -1.63
CCDC38Q502W7 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC38Q502W7 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC38Q502W7 AC010099.3-201ENST00000423896 409 ntBASIC4.88□□□□□ -1.63
CCDC38Q502W7 RBMY2QP-201ENST00000429799 1147 ntBASIC4.88□□□□□ -1.63
CCDC38Q502W7 VDAC1P6-201ENST00000430062 855 ntBASIC4.88□□□□□ -1.63
CCDC38Q502W7 HIGD1AP4-201ENST00000430194 280 ntBASIC4.88□□□□□ -1.63
CCDC38Q502W7 AC073143.1-201ENST00000436316 395 ntBASIC4.88□□□□□ -1.63
CCDC38Q502W7 RPL23AP16-201ENST00000441715 421 ntBASIC4.88□□□□□ -1.63
CCDC38Q502W7 AC011753.3-201ENST00000443436 406 ntBASIC4.88□□□□□ -1.63
CCDC38Q502W7 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC38Q502W7 BX276092.4-201ENST00000452056 248 ntBASIC4.88□□□□□ -1.63
CCDC38Q502W7 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.88□□□□□ -1.63
CCDC38Q502W7 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC38Q502W7 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC38Q502W7 RPL23AP2-201ENST00000471227 466 ntBASIC4.88□□□□□ -1.63
CCDC38Q502W7 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC38Q502W7 RNF138P1-201ENST00000502765 546 ntBASIC4.88□□□□□ -1.63
CCDC38Q502W7 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC38Q502W7 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC38Q502W7 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.88□□□□□ -1.63
CCDC38Q502W7 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC38Q502W7 AC090281.1-201ENST00000523019 276 ntBASIC4.88□□□□□ -1.63
CCDC38Q502W7 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.88□□□□□ -1.63
CCDC38Q502W7 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC38Q502W7 AC090502.2-201ENST00000549267 280 ntBASIC4.88□□□□□ -1.63
CCDC38Q502W7 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC38Q502W7 AC087465.1-201ENST00000560574 245 ntBASIC4.88□□□□□ -1.63
CCDC38Q502W7 AC093249.4-201ENST00000564755 259 ntBASIC4.88□□□□□ -1.63
CCDC38Q502W7 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC38Q502W7 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC38Q502W7 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC38Q502W7 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC38Q502W7 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC38Q502W7 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.88□□□□□ -1.63
CCDC38Q502W7 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.88□□□□□ -1.63
CCDC38Q502W7 COX6CP4-201ENST00000605798 228 ntBASIC4.88□□□□□ -1.63
CCDC38Q502W7 TUSC7.1-201ENST00000610969 165 ntBASIC4.88□□□□□ -1.63
CCDC38Q502W7 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.88□□□□□ -1.63
CCDC38Q502W7 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC38Q502W7 AL355493.4-201ENST00000618530 292 ntBASIC4.88□□□□□ -1.63
CCDC38Q502W7 AC069209.1-201ENST00000619282 651 ntBASIC4.88□□□□□ -1.63
CCDC38Q502W7 AP002799.1-201ENST00000623552 423 ntBASIC4.88□□□□□ -1.63
CCDC38Q502W7 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CCDC38Q502W7 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms