Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.8□□□□□ -1.64
PTCHD3Q3KNS1 MIR7844-201ENST00000616161 122 ntBASIC4.8□□□□□ -1.64
PTCHD3Q3KNS1 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.8□□□□□ -1.64
PTCHD3Q3KNS1 AL121890.2-201ENST00000617644 465 ntBASIC4.8□□□□□ -1.64
PTCHD3Q3KNS1 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
PTCHD3Q3KNS1 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.8□□□□□ -1.64
PTCHD3Q3KNS1 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PTCHD3Q3KNS1 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
PTCHD3Q3KNS1 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PTCHD3Q3KNS1 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 RN7SKP115-201ENST00000363177 317 ntBASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 Z97832.1-201ENST00000402490 328 ntBASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 PRRC2CP1-201ENST00000404428 159 ntBASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 RN7SKP216-201ENST00000411050 312 ntBASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 USP9YP33-201ENST00000412220 421 ntBASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 CEACAMP8-201ENST00000413902 580 ntBASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 RPL6P29-201ENST00000414863 865 ntBASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 MTCYBP38-201ENST00000417160 1123 ntBASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 AC008280.1-201ENST00000418851 412 ntBASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 AL589823.1-201ENST00000429577 183 ntBASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 RPL34P6-201ENST00000432390 345 ntBASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 USP9YP35-201ENST00000435696 412 ntBASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 MTND1P30-201ENST00000441241 901 ntBASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 AC112498.1-201ENST00000444401 332 ntBASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 SLC31A1P1-201ENST00000451221 567 ntBASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 RPL18AP17-201ENST00000455326 198 ntBASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 NDUFA12P1-201ENST00000455914 406 ntBASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 RPS15AP1-201ENST00000457423 391 ntBASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 RN7SL319P-201ENST00000480656 221 ntBASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 IGLV2-34-201ENST00000490007 283 ntBASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 ENPP7P9-201ENST00000514456 627 ntBASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 SOD1P3-201ENST00000518682 454 ntBASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 AC092851.1-201ENST00000535964 478 ntBASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 AC009117.1-201ENST00000563948 554 ntBASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 TVP23CP2-201ENST00000571473 623 ntBASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 AC020914.6-201ENST00000594327 272 ntBASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 AC008687.2-201ENST00000597865 520 ntBASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 AC073544.2-201ENST00000601155 540 ntBASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 AC123786.2-201ENST00000603459 275 ntBASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 AC090116.1-201ENST00000615679 446 ntBASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 AC015914.2-201ENST00000618167 288 ntBASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 AC019206.1-201ENST00000621938 425 ntBASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 AP001005.3-201ENST00000622049 129 ntBASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 AP001642.1-201ENST00000624727 2117 ntBASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTCHD3Q3KNS1 ZNF37BP-203ENST00000452306 1352 ntBASIC4.78□□□□□ -1.64
PTCHD3Q3KNS1 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PTCHD3Q3KNS1 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PTCHD3Q3KNS1 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PTCHD3Q3KNS1 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
PTCHD3Q3KNS1 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PTCHD3Q3KNS1 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms