Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.74□□□□□ -1.65
PDS5AQ29RF7 AL392048.1-201ENST00000613946 534 ntBASIC4.74□□□□□ -1.65
PDS5AQ29RF7 AL139089.1-201ENST00000620372 975 ntBASIC4.74□□□□□ -1.65
PDS5AQ29RF7 AC011266.1-201ENST00000624119 3569 ntBASIC4.74□□□□□ -1.65
PDS5AQ29RF7 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PDS5AQ29RF7 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
PDS5AQ29RF7 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.74□□□□□ -1.65
PDS5AQ29RF7 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PDS5AQ29RF7 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PDS5AQ29RF7 AL122126.1-201ENST00000546905 1318 ntBASIC4.74□□□□□ -1.65
PDS5AQ29RF7 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PDS5AQ29RF7 MTND4P26-201ENST00000415971 1359 ntBASIC4.74□□□□□ -1.65
PDS5AQ29RF7 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.74□□□□□ -1.65
PDS5AQ29RF7 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PDS5AQ29RF7 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
PDS5AQ29RF7 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDS5AQ29RF7 OR4A15-201ENST00000314706 1035 ntBASIC4.73□□□□□ -1.65
PDS5AQ29RF7 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDS5AQ29RF7 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDS5AQ29RF7 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
PDS5AQ29RF7 MIR513A2-201ENST00000385249 127 ntBASIC4.73□□□□□ -1.65
PDS5AQ29RF7 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.73□□□□□ -1.65
PDS5AQ29RF7 ATF1P1-201ENST00000406040 927 ntBASIC4.73□□□□□ -1.65
PDS5AQ29RF7 RN7SKP156-201ENST00000410308 342 ntBASIC4.73□□□□□ -1.65
PDS5AQ29RF7 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.73□□□□□ -1.65
PDS5AQ29RF7 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.73□□□□□ -1.65
PDS5AQ29RF7 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDS5AQ29RF7 MTND2P2-201ENST00000434633 945 ntBASIC4.73□□□□□ -1.65
PDS5AQ29RF7 FABP5P3-201ENST00000437960 408 ntBASIC4.73□□□□□ -1.65
PDS5AQ29RF7 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.73□□□□□ -1.65
PDS5AQ29RF7 AC069540.1-201ENST00000446320 988 ntBASIC4.73□□□□□ -1.65
PDS5AQ29RF7 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.73□□□□□ -1.65
PDS5AQ29RF7 AL591363.1-201ENST00000450091 483 ntBASIC4.73□□□□□ -1.65
PDS5AQ29RF7 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.73□□□□□ -1.65
PDS5AQ29RF7 AC025459.1-201ENST00000504072 156 ntBASIC4.73□□□□□ -1.65
PDS5AQ29RF7 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.73□□□□□ -1.65
PDS5AQ29RF7 AL049870.4-201ENST00000555741 486 ntBASIC4.73□□□□□ -1.65
PDS5AQ29RF7 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.73□□□□□ -1.65
PDS5AQ29RF7 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.73□□□□□ -1.65
PDS5AQ29RF7 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.73□□□□□ -1.65
PDS5AQ29RF7 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDS5AQ29RF7 AC099785.1-201ENST00000605697 437 ntBASIC4.73□□□□□ -1.65
PDS5AQ29RF7 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.73□□□□□ -1.65
PDS5AQ29RF7 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDS5AQ29RF7 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDS5AQ29RF7 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDS5AQ29RF7 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDS5AQ29RF7 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.73□□□□□ -1.65
PDS5AQ29RF7 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.73□□□□□ -1.65
PDS5AQ29RF7 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.73□□□□□ -1.65
PDS5AQ29RF7 AC083865.1-201ENST00000636634 831 ntBASIC4.73□□□□□ -1.65
PDS5AQ29RF7 AC012442.3-202ENST00000636742 206 ntBASIC4.73□□□□□ -1.65
PDS5AQ29RF7 AL773545.4-201ENST00000637262 310 ntBASIC4.73□□□□□ -1.65
PDS5AQ29RF7 AL513478.4-201ENST00000641636 310 ntBASIC4.73□□□□□ -1.65
PDS5AQ29RF7 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PDS5AQ29RF7 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.73□□□□□ -1.65
PDS5AQ29RF7 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDS5AQ29RF7 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDS5AQ29RF7 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PDS5AQ29RF7 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
PDS5AQ29RF7 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDS5AQ29RF7 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDS5AQ29RF7 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
PDS5AQ29RF7 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
PDS5AQ29RF7 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
PDS5AQ29RF7 RNU4-7P-201ENST00000364758 141 ntBASIC4.72□□□□□ -1.65
PDS5AQ29RF7 RNU6-1263P-201ENST00000384601 106 ntBASIC4.72□□□□□ -1.65
PDS5AQ29RF7 U8.11-201ENST00000384699 133 ntBASIC4.72□□□□□ -1.65
PDS5AQ29RF7 U8.12-201ENST00000384701 133 ntBASIC4.72□□□□□ -1.65
PDS5AQ29RF7 MIR30B-201ENST00000384850 88 ntBASIC4.72□□□□□ -1.65
PDS5AQ29RF7 SNORA3.3-201ENST00000408712 125 ntBASIC4.72□□□□□ -1.65
PDS5AQ29RF7 SNORA57.3-201ENST00000411095 141 ntBASIC4.72□□□□□ -1.65
PDS5AQ29RF7 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.72□□□□□ -1.65
PDS5AQ29RF7 NPM1P34-201ENST00000428821 893 ntBASIC4.72□□□□□ -1.65
PDS5AQ29RF7 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.72□□□□□ -1.65
PDS5AQ29RF7 TPTE2P3-201ENST00000441562 1189 ntBASIC4.72□□□□□ -1.65
PDS5AQ29RF7 EXOSC3P1-201ENST00000448649 500 ntBASIC4.72□□□□□ -1.65
PDS5AQ29RF7 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.72□□□□□ -1.65
PDS5AQ29RF7 AL009048.1-201ENST00000450437 298 ntBASIC4.72□□□□□ -1.65
PDS5AQ29RF7 U8.18-201ENST00000459285 133 ntBASIC4.72□□□□□ -1.65
PDS5AQ29RF7 AC010469.1-201ENST00000463864 576 ntBASIC4.72□□□□□ -1.65
PDS5AQ29RF7 RPL5P30-201ENST00000465511 891 ntBASIC4.72□□□□□ -1.65
PDS5AQ29RF7 PPIAP15-201ENST00000479662 484 ntBASIC4.72□□□□□ -1.65
PDS5AQ29RF7 AC023632.4-201ENST00000517783 191 ntBASIC4.72□□□□□ -1.65
PDS5AQ29RF7 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.72□□□□□ -1.65
PDS5AQ29RF7 AC008802.1-201ENST00000519121 791 ntBASIC4.72□□□□□ -1.65
PDS5AQ29RF7 AP001207.2-201ENST00000519490 539 ntBASIC4.72□□□□□ -1.65
PDS5AQ29RF7 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.72□□□□□ -1.65
PDS5AQ29RF7 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.72□□□□□ -1.65
PDS5AQ29RF7 NPM1P47-201ENST00000560843 856 ntBASIC4.72□□□□□ -1.65
PDS5AQ29RF7 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.72□□□□□ -1.65
PDS5AQ29RF7 AC084373.1-201ENST00000603311 235 ntBASIC4.72□□□□□ -1.65
PDS5AQ29RF7 AC008638.3-201ENST00000603341 463 ntBASIC4.72□□□□□ -1.65
PDS5AQ29RF7 AL445435.1-201ENST00000604232 665 ntBASIC4.72□□□□□ -1.65
PDS5AQ29RF7 AC005344.1-201ENST00000613391 459 ntBASIC4.72□□□□□ -1.65
PDS5AQ29RF7 AC026368.1-201ENST00000614934 690 ntBASIC4.72□□□□□ -1.65
PDS5AQ29RF7 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDS5AQ29RF7 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDS5AQ29RF7 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDS5AQ29RF7 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms