Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC116563.2-201ENST00000624751 535 ntBASIC3.99□□□□□ -1.77
TPM4P67936 MIR492-201ENST00000638676 116 ntBASIC3.99□□□□□ -1.77
TPM4P67936 AC119674.1-212ENST00000641155 993 ntBASIC3.99□□□□□ -1.77
TPM4P67936 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TPM4P67936 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
TPM4P67936 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TPM4P67936 MIR30E-201ENST00000362104 92 ntBASIC3.98□□□□□ -1.77
TPM4P67936 SNORA73.2-201ENST00000364946 201 ntBASIC3.98□□□□□ -1.77
TPM4P67936 AP002088.1-201ENST00000382740 395 ntBASIC3.98□□□□□ -1.77
TPM4P67936 RPS7P13-201ENST00000413955 498 ntBASIC3.98□□□□□ -1.77
TPM4P67936 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.98□□□□□ -1.77
TPM4P67936 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.98□□□□□ -1.77
TPM4P67936 MTCO1P52-201ENST00000433928 531 ntBASIC3.98□□□□□ -1.77
TPM4P67936 BX679664.1-201ENST00000434429 253 ntBASIC3.98□□□□□ -1.77
TPM4P67936 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.98□□□□□ -1.77
TPM4P67936 AL645931.1-201ENST00000439737 410 ntBASIC3.98□□□□□ -1.77
TPM4P67936 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.98□□□□□ -1.77
TPM4P67936 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TPM4P67936 AL162151.2-201ENST00000448875 158 ntBASIC3.98□□□□□ -1.77
TPM4P67936 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.98□□□□□ -1.77
TPM4P67936 TVP23BP2-201ENST00000455082 615 ntBASIC3.98□□□□□ -1.77
TPM4P67936 RPS7P7-201ENST00000463499 571 ntBASIC3.98□□□□□ -1.77
TPM4P67936 RPL23AP12-201ENST00000467573 473 ntBASIC3.98□□□□□ -1.77
TPM4P67936 AP001086.1-201ENST00000494882 321 ntBASIC3.98□□□□□ -1.77
TPM4P67936 HMGB1P21-201ENST00000502313 581 ntBASIC3.98□□□□□ -1.77
TPM4P67936 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TPM4P67936 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.98□□□□□ -1.77
TPM4P67936 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.98□□□□□ -1.77
TPM4P67936 AP006245.1-201ENST00000522549 120 ntBASIC3.98□□□□□ -1.77
TPM4P67936 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.98□□□□□ -1.77
TPM4P67936 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
TPM4P67936 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TPM4P67936 AC026333.2-201ENST00000542164 106 ntBASIC3.98□□□□□ -1.77
TPM4P67936 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC3.98□□□□□ -1.77
TPM4P67936 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.98□□□□□ -1.77
TPM4P67936 AL845331.3-202ENST00000562856 261 ntBASIC3.98□□□□□ -1.77
TPM4P67936 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.98□□□□□ -1.77
TPM4P67936 AC037471.2-201ENST00000564941 598 ntBASIC3.98□□□□□ -1.77
TPM4P67936 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.98□□□□□ -1.77
TPM4P67936 AC006270.2-201ENST00000578523 652 ntBASIC3.98□□□□□ -1.77
TPM4P67936 NF1P5-201ENST00000588287 448 ntBASIC3.98□□□□□ -1.77
TPM4P67936 AP003355.3-201ENST00000623465 114 ntBASIC3.98□□□□□ -1.77
TPM4P67936 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC3.98□□□□□ -1.77
TPM4P67936 RNF6P1-201ENST00000444889 1784 ntBASIC3.98□□□□□ -1.77
TPM4P67936 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.98□□□□□ -1.77
TPM4P67936 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
TPM4P67936 AP004289.2-201ENST00000444413 1457 ntBASIC3.98□□□□□ -1.77
TPM4P67936 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TPM4P67936 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TPM4P67936 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
TPM4P67936 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TPM4P67936 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
TPM4P67936 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
TPM4P67936 RNU6-213P-201ENST00000384051 104 ntBASIC3.97□□□□□ -1.77
TPM4P67936 MIR323B-201ENST00000385269 82 ntBASIC3.97□□□□□ -1.77
TPM4P67936 SNORD65-201ENST00000391079 73 ntBASIC3.97□□□□□ -1.77
TPM4P67936 SKINT1L-201ENST00000401057 817 ntBASIC3.97□□□□□ -1.77
TPM4P67936 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.97□□□□□ -1.77
TPM4P67936 COX6CP17-201ENST00000421389 185 ntBASIC3.97□□□□□ -1.77
TPM4P67936 FAR1P1-201ENST00000427163 934 ntBASIC3.97□□□□□ -1.77
TPM4P67936 AL591419.1-201ENST00000427423 339 ntBASIC3.97□□□□□ -1.77
TPM4P67936 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.97□□□□□ -1.77
TPM4P67936 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.97□□□□□ -1.77
TPM4P67936 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TPM4P67936 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.97□□□□□ -1.77
TPM4P67936 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.97□□□□□ -1.77
TPM4P67936 CEACAMP4-201ENST00000457676 421 ntBASIC3.97□□□□□ -1.77
TPM4P67936 RNU7-27P-201ENST00000459281 62 ntBASIC3.97□□□□□ -1.77
TPM4P67936 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.97□□□□□ -1.77
TPM4P67936 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.97□□□□□ -1.77
TPM4P67936 AC006518.1-201ENST00000541449 943 ntBASIC3.97□□□□□ -1.77
TPM4P67936 AC004024.1-201ENST00000549244 247 ntBASIC3.97□□□□□ -1.77
TPM4P67936 OR4U1P-201ENST00000554958 912 ntBASIC3.97□□□□□ -1.77
TPM4P67936 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.97□□□□□ -1.77
TPM4P67936 KPNA2P3-201ENST00000584190 848 ntBASIC3.97□□□□□ -1.77
TPM4P67936 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TPM4P67936 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.97□□□□□ -1.77
TPM4P67936 AP003117.2-201ENST00000606010 545 ntBASIC3.97□□□□□ -1.77
TPM4P67936 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.97□□□□□ -1.77
TPM4P67936 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.97□□□□□ -1.77
TPM4P67936 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
TPM4P67936 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.97□□□□□ -1.77
TPM4P67936 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TPM4P67936 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
TPM4P67936 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
TPM4P67936 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.96□□□□□ -1.78
TPM4P67936 SOD2P1-201ENST00000396543 562 ntBASIC3.96□□□□□ -1.78
TPM4P67936 RNA5SP293-201ENST00000410527 113 ntBASIC3.96□□□□□ -1.78
TPM4P67936 AC069218.2-201ENST00000411665 344 ntBASIC3.96□□□□□ -1.78
TPM4P67936 RANP4-201ENST00000413361 655 ntBASIC3.96□□□□□ -1.78
TPM4P67936 PRELID3BP11-201ENST00000414230 479 ntBASIC3.96□□□□□ -1.78
TPM4P67936 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.96□□□□□ -1.78
TPM4P67936 AL139247.1-201ENST00000422768 325 ntBASIC3.96□□□□□ -1.78
TPM4P67936 RPL18P10-201ENST00000425606 538 ntBASIC3.96□□□□□ -1.78
TPM4P67936 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.96□□□□□ -1.78
TPM4P67936 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.96□□□□□ -1.78
TPM4P67936 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.96□□□□□ -1.78
TPM4P67936 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.96□□□□□ -1.78
TPM4P67936 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.96□□□□□ -1.78
TPM4P67936 AC125238.1-201ENST00000448842 249 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms