Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 BNIP3P38-201ENST00000601117 544 ntBASIC3.19□□□□□ -1.9
AP3S2P59780 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.19□□□□□ -1.9
AP3S2P59780 AC091167.4-201ENST00000605079 184 ntBASIC3.19□□□□□ -1.9
AP3S2P59780 HMGN2P28-201ENST00000606102 262 ntBASIC3.19□□□□□ -1.9
AP3S2P59780 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.19□□□□□ -1.9
AP3S2P59780 AC011816.2-201ENST00000607089 556 ntBASIC3.19□□□□□ -1.9
AP3S2P59780 MIR6864-201ENST00000617935 70 ntBASIC3.19□□□□□ -1.9
AP3S2P59780 AC018816.2-201ENST00000621460 353 ntBASIC3.19□□□□□ -1.9
AP3S2P59780 AC110801.1-201ENST00000623590 212 ntBASIC3.19□□□□□ -1.9
AP3S2P59780 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.19□□□□□ -1.9
AP3S2P59780 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.19□□□□□ -1.9
AP3S2P59780 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.19□□□□□ -1.9
AP3S2P59780 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.19□□□□□ -1.9
AP3S2P59780 AC026951.1-201ENST00000559530 2459 ntBASIC3.19□□□□□ -1.9
AP3S2P59780 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
AP3S2P59780 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.19□□□□□ -1.9
AP3S2P59780 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
AP3S2P59780 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
AP3S2P59780 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
AP3S2P59780 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
AP3S2P59780 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.18□□□□□ -1.9
AP3S2P59780 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.18□□□□□ -1.9
AP3S2P59780 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
AP3S2P59780 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
AP3S2P59780 SNORA73.2-201ENST00000364946 201 ntBASIC3.18□□□□□ -1.9
AP3S2P59780 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
AP3S2P59780 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC3.18□□□□□ -1.9
AP3S2P59780 RPS29P17-201ENST00000430795 166 ntBASIC3.18□□□□□ -1.9
AP3S2P59780 TXNP2-201ENST00000443918 295 ntBASIC3.18□□□□□ -1.9
AP3S2P59780 RPS11P1-201ENST00000451072 473 ntBASIC3.18□□□□□ -1.9
AP3S2P59780 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.18□□□□□ -1.9
AP3S2P59780 RPS23P7-201ENST00000466210 444 ntBASIC3.18□□□□□ -1.9
AP3S2P59780 RN7SL101P-201ENST00000496350 279 ntBASIC3.18□□□□□ -1.9
AP3S2P59780 AC110768.1-201ENST00000509222 400 ntBASIC3.18□□□□□ -1.9
AP3S2P59780 AC005351.1-201ENST00000511152 786 ntBASIC3.18□□□□□ -1.9
AP3S2P59780 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.18□□□□□ -1.9
AP3S2P59780 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.18□□□□□ -1.9
AP3S2P59780 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.18□□□□□ -1.9
AP3S2P59780 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.18□□□□□ -1.9
AP3S2P59780 RN7SKP289-201ENST00000517244 295 ntBASIC3.18□□□□□ -1.9
AP3S2P59780 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.18□□□□□ -1.9
AP3S2P59780 AC004024.1-201ENST00000549244 247 ntBASIC3.18□□□□□ -1.9
AP3S2P59780 MIR4489-201ENST00000578869 62 ntBASIC3.18□□□□□ -1.9
AP3S2P59780 MIR548Y-201ENST00000582739 110 ntBASIC3.18□□□□□ -1.9
AP3S2P59780 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.18□□□□□ -1.9
AP3S2P59780 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.18□□□□□ -1.9
AP3S2P59780 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
AP3S2P59780 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
AP3S2P59780 RPL12P25-202ENST00000598100 674 ntBASIC3.18□□□□□ -1.9
AP3S2P59780 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.18□□□□□ -1.9
AP3S2P59780 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
AP3S2P59780 AC016877.3-201ENST00000606778 504 ntBASIC3.18□□□□□ -1.9
AP3S2P59780 AC107294.3-201ENST00000609211 526 ntBASIC3.18□□□□□ -1.9
AP3S2P59780 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
AP3S2P59780 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
AP3S2P59780 AL136164.4-201ENST00000625013 2135 ntBASIC3.18□□□□□ -1.9
AP3S2P59780 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
AP3S2P59780 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
AP3S2P59780 AC007496.3-201ENST00000624987 3443 ntBASIC3.18□□□□□ -1.9
AP3S2P59780 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
AP3S2P59780 AC073073.2-201ENST00000609827 2578 ntBASIC3.17□□□□□ -1.9
AP3S2P59780 MTCO1P24-201ENST00000515438 1558 ntBASIC3.17□□□□□ -1.9
AP3S2P59780 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.17□□□□□ -1.9
AP3S2P59780 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.17□□□□□ -1.9
AP3S2P59780 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
AP3S2P59780 AL513302.2-201ENST00000562313 1842 ntBASIC3.17□□□□□ -1.9
AP3S2P59780 RAD1P1-201ENST00000231383 813 ntBASIC3.17□□□□□ -1.9
AP3S2P59780 OR4A15-201ENST00000314706 1035 ntBASIC3.17□□□□□ -1.9
AP3S2P59780 RNU1-132P-201ENST00000364300 164 ntBASIC3.17□□□□□ -1.9
AP3S2P59780 RNA5SP97-201ENST00000365006 84 ntBASIC3.17□□□□□ -1.9
AP3S2P59780 RNU11-4P-201ENST00000391149 133 ntBASIC3.17□□□□□ -1.9
AP3S2P59780 RNA5SP107-201ENST00000411358 122 ntBASIC3.17□□□□□ -1.9
AP3S2P59780 TPT1P2-201ENST00000413105 503 ntBASIC3.17□□□□□ -1.9
AP3S2P59780 AC011933.1-201ENST00000413334 321 ntBASIC3.17□□□□□ -1.9
AP3S2P59780 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.17□□□□□ -1.9
AP3S2P59780 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.17□□□□□ -1.9
AP3S2P59780 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.17□□□□□ -1.9
AP3S2P59780 BX679664.1-201ENST00000434429 253 ntBASIC3.17□□□□□ -1.9
AP3S2P59780 AC104308.1-201ENST00000454621 333 ntBASIC3.17□□□□□ -1.9
AP3S2P59780 RPL37P3-201ENST00000456825 293 ntBASIC3.17□□□□□ -1.9
AP3S2P59780 RPL23AP24-201ENST00000458203 385 ntBASIC3.17□□□□□ -1.9
AP3S2P59780 AC116533.1-201ENST00000459748 321 ntBASIC3.17□□□□□ -1.9
AP3S2P59780 RPS27P29-201ENST00000463110 252 ntBASIC3.17□□□□□ -1.9
AP3S2P59780 AC006463.2-201ENST00000473326 348 ntBASIC3.17□□□□□ -1.9
AP3S2P59780 RN7SL442P-201ENST00000473804 320 ntBASIC3.17□□□□□ -1.9
AP3S2P59780 RN7SL629P-201ENST00000489622 285 ntBASIC3.17□□□□□ -1.9
AP3S2P59780 RAC1P2-201ENST00000511164 579 ntBASIC3.17□□□□□ -1.9
AP3S2P59780 AC108120.2-201ENST00000512973 294 ntBASIC3.17□□□□□ -1.9
AP3S2P59780 RNU2-27P-201ENST00000516185 142 ntBASIC3.17□□□□□ -1.9
AP3S2P59780 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC3.17□□□□□ -1.9
AP3S2P59780 IGKV2D-19-201ENST00000523346 262 ntBASIC3.17□□□□□ -1.9
AP3S2P59780 MTCO1P49-201ENST00000523429 802 ntBASIC3.17□□□□□ -1.9
AP3S2P59780 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.17□□□□□ -1.9
AP3S2P59780 AC012146.2-201ENST00000576545 416 ntBASIC3.17□□□□□ -1.9
AP3S2P59780 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.17□□□□□ -1.9
AP3S2P59780 SNRPGP15-201ENST00000600149 222 ntBASIC3.17□□□□□ -1.9
AP3S2P59780 AC068790.7-201ENST00000602347 528 ntBASIC3.17□□□□□ -1.9
AP3S2P59780 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.17□□□□□ -1.9
AP3S2P59780 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.17□□□□□ -1.9
AP3S2P59780 AL590410.1-201ENST00000617925 333 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms