Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC092809.1-201ENST00000441469 474 ntBASIC4.68□□□□□ -1.66
HDAC4P56524 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.68□□□□□ -1.66
HDAC4P56524 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.68□□□□□ -1.66
HDAC4P56524 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC4.68□□□□□ -1.66
HDAC4P56524 RPL23AP72-201ENST00000492447 435 ntBASIC4.68□□□□□ -1.66
HDAC4P56524 AC108022.1-201ENST00000493466 478 ntBASIC4.68□□□□□ -1.66
HDAC4P56524 AC008897.1-201ENST00000494006 347 ntBASIC4.68□□□□□ -1.66
HDAC4P56524 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HDAC4P56524 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.68□□□□□ -1.66
HDAC4P56524 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.68□□□□□ -1.66
HDAC4P56524 C1GALT1P3-201ENST00000522049 819 ntBASIC4.68□□□□□ -1.66
HDAC4P56524 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HDAC4P56524 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.68□□□□□ -1.66
HDAC4P56524 AC023538.1-201ENST00000534576 736 ntBASIC4.68□□□□□ -1.66
HDAC4P56524 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.68□□□□□ -1.66
HDAC4P56524 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.68□□□□□ -1.66
HDAC4P56524 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.68□□□□□ -1.66
HDAC4P56524 MIR4284-201ENST00000578924 81 ntBASIC4.68□□□□□ -1.66
HDAC4P56524 AC069061.3-201ENST00000582254 823 ntBASIC4.68□□□□□ -1.66
HDAC4P56524 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.68□□□□□ -1.66
HDAC4P56524 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HDAC4P56524 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.68□□□□□ -1.66
HDAC4P56524 AC008782.1-201ENST00000603386 430 ntBASIC4.68□□□□□ -1.66
HDAC4P56524 AC113368.1-201ENST00000603736 382 ntBASIC4.68□□□□□ -1.66
HDAC4P56524 AL392112.1-201ENST00000605115 829 ntBASIC4.68□□□□□ -1.66
HDAC4P56524 AL583856.2-201ENST00000606298 543 ntBASIC4.68□□□□□ -1.66
HDAC4P56524 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.68□□□□□ -1.66
HDAC4P56524 AC020634.1-201ENST00000608701 549 ntBASIC4.68□□□□□ -1.66
HDAC4P56524 AC092106.3-201ENST00000611308 722 ntBASIC4.68□□□□□ -1.66
HDAC4P56524 AL353726.1-201ENST00000614041 1000 ntBASIC4.68□□□□□ -1.66
HDAC4P56524 MIR6891-201ENST00000618788 93 ntBASIC4.68□□□□□ -1.66
HDAC4P56524 AL158163.2-201ENST00000619110 700 ntBASIC4.68□□□□□ -1.66
HDAC4P56524 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.68□□□□□ -1.66
HDAC4P56524 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.68□□□□□ -1.66
HDAC4P56524 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.68□□□□□ -1.66
HDAC4P56524 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HDAC4P56524 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.68□□□□□ -1.66
HDAC4P56524 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HDAC4P56524 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.68□□□□□ -1.66
HDAC4P56524 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.68□□□□□ -1.66
HDAC4P56524 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.68□□□□□ -1.66
HDAC4P56524 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HDAC4P56524 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.68□□□□□ -1.66
HDAC4P56524 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HDAC4P56524 AL592437.2-201ENST00000421655 2434 ntBASIC4.67□□□□□ -1.66
HDAC4P56524 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
HDAC4P56524 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
HDAC4P56524 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.67□□□□□ -1.66
HDAC4P56524 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HDAC4P56524 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
HDAC4P56524 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
HDAC4P56524 SNORA70.2-201ENST00000364506 135 ntBASIC4.67□□□□□ -1.66
HDAC4P56524 RNU6-398P-201ENST00000384143 109 ntBASIC4.67□□□□□ -1.66
HDAC4P56524 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
HDAC4P56524 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HDAC4P56524 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HDAC4P56524 AL356320.2-201ENST00000417263 507 ntBASIC4.67□□□□□ -1.66
HDAC4P56524 MTND2P16-201ENST00000419987 799 ntBASIC4.67□□□□□ -1.66
HDAC4P56524 RPL7AP25-201ENST00000423357 805 ntBASIC4.67□□□□□ -1.66
HDAC4P56524 RPL7P4-203ENST00000430239 730 ntBASIC4.67□□□□□ -1.66
HDAC4P56524 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.67□□□□□ -1.66
HDAC4P56524 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.67□□□□□ -1.66
HDAC4P56524 AC112492.1-201ENST00000449607 712 ntBASIC4.67□□□□□ -1.66
HDAC4P56524 AL162591.2-201ENST00000449634 317 ntBASIC4.67□□□□□ -1.66
HDAC4P56524 AC104306.1-201ENST00000449702 371 ntBASIC4.67□□□□□ -1.66
HDAC4P56524 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.67□□□□□ -1.66
HDAC4P56524 AC012671.1-201ENST00000451912 203 ntBASIC4.67□□□□□ -1.66
HDAC4P56524 NDUFA12P1-201ENST00000455914 406 ntBASIC4.67□□□□□ -1.66
HDAC4P56524 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
HDAC4P56524 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.67□□□□□ -1.66
HDAC4P56524 RN7SL459P-201ENST00000481078 302 ntBASIC4.67□□□□□ -1.66
HDAC4P56524 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.67□□□□□ -1.66
HDAC4P56524 FTH1P24-201ENST00000503502 462 ntBASIC4.67□□□□□ -1.66
HDAC4P56524 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.67□□□□□ -1.66
HDAC4P56524 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.67□□□□□ -1.66
HDAC4P56524 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.67□□□□□ -1.66
HDAC4P56524 AC022790.1-201ENST00000522872 204 ntBASIC4.67□□□□□ -1.66
HDAC4P56524 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.67□□□□□ -1.66
HDAC4P56524 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HDAC4P56524 AP000827.1-201ENST00000527814 258 ntBASIC4.67□□□□□ -1.66
HDAC4P56524 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.67□□□□□ -1.66
HDAC4P56524 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.67□□□□□ -1.66
HDAC4P56524 PARP1P2-201ENST00000556806 195 ntBASIC4.67□□□□□ -1.66
HDAC4P56524 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.67□□□□□ -1.66
HDAC4P56524 AC009097.3-201ENST00000563557 1018 ntBASIC4.67□□□□□ -1.66
HDAC4P56524 AC023813.2-201ENST00000564321 469 ntBASIC4.67□□□□□ -1.66
HDAC4P56524 AC009712.1-201ENST00000564938 316 ntBASIC4.67□□□□□ -1.66
HDAC4P56524 AC084783.1-201ENST00000565846 910 ntBASIC4.67□□□□□ -1.66
HDAC4P56524 HNRNPCP4-201ENST00000571636 900 ntBASIC4.67□□□□□ -1.66
HDAC4P56524 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.67□□□□□ -1.66
HDAC4P56524 AC245036.5-201ENST00000596330 847 ntBASIC4.67□□□□□ -1.66
HDAC4P56524 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.67□□□□□ -1.66
HDAC4P56524 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.67□□□□□ -1.66
HDAC4P56524 AC115286.1-201ENST00000604298 434 ntBASIC4.67□□□□□ -1.66
HDAC4P56524 OR6R2P-201ENST00000609216 300 ntBASIC4.67□□□□□ -1.66
HDAC4P56524 AC067852.7-201ENST00000623270 535 ntBASIC4.67□□□□□ -1.66
HDAC4P56524 AC120349.3-201ENST00000624377 529 ntBASIC4.67□□□□□ -1.66
HDAC4P56524 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
HDAC4P56524 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
HDAC4P56524 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms