Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 RPS12P23-201ENST00000419579 400 ntBASIC3.91□□□□□ -1.78
CDH6P55285 RFESDP1-201ENST00000422350 461 ntBASIC3.91□□□□□ -1.78
CDH6P55285 AC092832.1-201ENST00000422934 400 ntBASIC3.91□□□□□ -1.78
CDH6P55285 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.91□□□□□ -1.78
CDH6P55285 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.91□□□□□ -1.78
CDH6P55285 AL353093.1-201ENST00000441292 436 ntBASIC3.91□□□□□ -1.78
CDH6P55285 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH6P55285 ANP32BP2-201ENST00000454525 545 ntBASIC3.91□□□□□ -1.78
CDH6P55285 AC010307.1-201ENST00000467206 836 ntBASIC3.91□□□□□ -1.78
CDH6P55285 HMGB1P21-201ENST00000502313 581 ntBASIC3.91□□□□□ -1.78
CDH6P55285 FTH1P24-201ENST00000503502 462 ntBASIC3.91□□□□□ -1.78
CDH6P55285 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
CDH6P55285 OR5H4P-201ENST00000510851 923 ntBASIC3.91□□□□□ -1.78
CDH6P55285 RN7SKP82-201ENST00000516786 223 ntBASIC3.91□□□□□ -1.78
CDH6P55285 SCARNA14-201ENST00000516903 136 ntBASIC3.91□□□□□ -1.78
CDH6P55285 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH6P55285 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH6P55285 AL109741.3-201ENST00000561748 592 ntBASIC3.91□□□□□ -1.78
CDH6P55285 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.91□□□□□ -1.78
CDH6P55285 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.91□□□□□ -1.78
CDH6P55285 AC022916.3-201ENST00000592961 742 ntBASIC3.91□□□□□ -1.78
CDH6P55285 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH6P55285 AC244505.7-201ENST00000599675 272 ntBASIC3.91□□□□□ -1.78
CDH6P55285 AC010680.4-201ENST00000605334 543 ntBASIC3.91□□□□□ -1.78
CDH6P55285 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH6P55285 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CDH6P55285 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.91□□□□□ -1.78
CDH6P55285 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CDH6P55285 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
CDH6P55285 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDH6P55285 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CDH6P55285 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CDH6P55285 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
CDH6P55285 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CDH6P55285 GTF2H2B-203ENST00000508065 1432 ntBASIC3.9□□□□□ -1.78
CDH6P55285 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.9□□□□□ -1.78
CDH6P55285 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.9□□□□□ -1.79
CDH6P55285 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CDH6P55285 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CDH6P55285 RNU4-74P-201ENST00000411280 161 ntBASIC3.9□□□□□ -1.79
CDH6P55285 LINC01881-201ENST00000416103 412 ntBASIC3.9□□□□□ -1.79
CDH6P55285 MTND2P15-201ENST00000418575 892 ntBASIC3.9□□□□□ -1.79
CDH6P55285 RPL21P109-201ENST00000422213 475 ntBASIC3.9□□□□□ -1.79
CDH6P55285 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH6P55285 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.9□□□□□ -1.79
CDH6P55285 ELOCP11-201ENST00000436690 332 ntBASIC3.9□□□□□ -1.79
CDH6P55285 ELOCP16-201ENST00000444494 332 ntBASIC3.9□□□□□ -1.79
CDH6P55285 AC006480.1-201ENST00000449887 378 ntBASIC3.9□□□□□ -1.79
CDH6P55285 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.9□□□□□ -1.79
CDH6P55285 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH6P55285 AC012170.1-201ENST00000495139 359 ntBASIC3.9□□□□□ -1.79
CDH6P55285 AL139099.1-201ENST00000497398 403 ntBASIC3.9□□□□□ -1.79
CDH6P55285 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.9□□□□□ -1.79
CDH6P55285 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH6P55285 OR4C2P-201ENST00000530855 1064 ntBASIC3.9□□□□□ -1.79
CDH6P55285 AC092851.1-201ENST00000535964 478 ntBASIC3.9□□□□□ -1.79
CDH6P55285 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH6P55285 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH6P55285 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH6P55285 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH6P55285 RN7SL703P-201ENST00000578485 302 ntBASIC3.9□□□□□ -1.79
CDH6P55285 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH6P55285 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.9□□□□□ -1.79
CDH6P55285 AL049634.3-201ENST00000604968 457 ntBASIC3.9□□□□□ -1.79
CDH6P55285 AC090912.3-201ENST00000609775 533 ntBASIC3.9□□□□□ -1.79
CDH6P55285 AL354798.1-201ENST00000622505 329 ntBASIC3.9□□□□□ -1.79
CDH6P55285 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CDH6P55285 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CDH6P55285 AC066616.2-201ENST00000559334 1481 ntBASIC3.9□□□□□ -1.79
CDH6P55285 MTND4P31-201ENST00000425607 1343 ntBASIC3.9□□□□□ -1.79
CDH6P55285 AL627171.1-201ENST00000618845 1308 ntBASIC3.9□□□□□ -1.79
CDH6P55285 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
CDH6P55285 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDH6P55285 AC025125.1-201ENST00000624743 1922 ntBASIC3.89□□□□□ -1.79
CDH6P55285 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CDH6P55285 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.89□□□□□ -1.79
CDH6P55285 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDH6P55285 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.89□□□□□ -1.79
CDH6P55285 SNORA27.3-201ENST00000364937 134 ntBASIC3.89□□□□□ -1.79
CDH6P55285 MIR30B-201ENST00000384850 88 ntBASIC3.89□□□□□ -1.79
CDH6P55285 RNA5SP424-201ENST00000390988 115 ntBASIC3.89□□□□□ -1.79
CDH6P55285 AL138878.1-201ENST00000405131 347 ntBASIC3.89□□□□□ -1.79
CDH6P55285 AL390879.2-203ENST00000426943 1121 ntBASIC3.89□□□□□ -1.79
CDH6P55285 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.89□□□□□ -1.79
CDH6P55285 SETD6P1-201ENST00000444575 317 ntBASIC3.89□□□□□ -1.79
CDH6P55285 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CDH6P55285 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.89□□□□□ -1.79
CDH6P55285 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH6P55285 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.89□□□□□ -1.79
CDH6P55285 AC093267.1-201ENST00000489176 961 ntBASIC3.89□□□□□ -1.79
CDH6P55285 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH6P55285 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.89□□□□□ -1.79
CDH6P55285 RN7SKP83-201ENST00000516512 178 ntBASIC3.89□□□□□ -1.79
CDH6P55285 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH6P55285 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.89□□□□□ -1.79
CDH6P55285 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH6P55285 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH6P55285 AC006960.3-201ENST00000561845 705 ntBASIC3.89□□□□□ -1.79
CDH6P55285 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC3.89□□□□□ -1.79
CDH6P55285 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms