Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.12□□□□□ -1.75
NUP98P52948 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.12□□□□□ -1.75
NUP98P52948 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.12□□□□□ -1.75
NUP98P52948 HMGB1P19-201ENST00000517578 577 ntBASIC4.12□□□□□ -1.75
NUP98P52948 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.12□□□□□ -1.75
NUP98P52948 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.12□□□□□ -1.75
NUP98P52948 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.12□□□□□ -1.75
NUP98P52948 MIR2682-201ENST00000580305 110 ntBASIC4.12□□□□□ -1.75
NUP98P52948 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.12□□□□□ -1.75
NUP98P52948 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.12□□□□□ -1.75
NUP98P52948 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NUP98P52948 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
NUP98P52948 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NUP98P52948 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NUP98P52948 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.12□□□□□ -1.75
NUP98P52948 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.12□□□□□ -1.75
NUP98P52948 AL022322.2-201ENST00000624072 20397 ntBASIC4.12□□□□□ -1.75
NUP98P52948 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NUP98P52948 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NUP98P52948 AC020633.1-201ENST00000468439 2247 ntBASIC4.12□□□□□ -1.75
NUP98P52948 AC017071.1-201ENST00000564407 2204 ntBASIC4.12□□□□□ -1.75
NUP98P52948 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
NUP98P52948 SNORA7.4-201ENST00000384249 137 ntBASIC4.11□□□□□ -1.75
NUP98P52948 U3.26-201ENST00000391236 204 ntBASIC4.11□□□□□ -1.75
NUP98P52948 AL031121.1-201ENST00000406553 254 ntBASIC4.11□□□□□ -1.75
NUP98P52948 AC010307.1-201ENST00000467206 836 ntBASIC4.11□□□□□ -1.75
NUP98P52948 ACTG1P13-201ENST00000486987 1043 ntBASIC4.11□□□□□ -1.75
NUP98P52948 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.11□□□□□ -1.75
NUP98P52948 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.11□□□□□ -1.75
NUP98P52948 AC106785.3-201ENST00000564064 847 ntBASIC4.11□□□□□ -1.75
NUP98P52948 AC099489.2-201ENST00000574976 260 ntBASIC4.11□□□□□ -1.75
NUP98P52948 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.11□□□□□ -1.75
NUP98P52948 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.11□□□□□ -1.75
NUP98P52948 AC006557.5-201ENST00000603126 811 ntBASIC4.11□□□□□ -1.75
NUP98P52948 AL359715.5-201ENST00000623431 443 ntBASIC4.11□□□□□ -1.75
NUP98P52948 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.11□□□□□ -1.75
NUP98P52948 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
NUP98P52948 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.11□□□□□ -1.75
NUP98P52948 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NUP98P52948 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NUP98P52948 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
NUP98P52948 AC093698.1-201ENST00000423843 571 ntBASIC4.11□□□□□ -1.75
NUP98P52948 SKP1P1-201ENST00000438081 489 ntBASIC4.11□□□□□ -1.75
NUP98P52948 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.11□□□□□ -1.75
NUP98P52948 AC110794.1-201ENST00000505816 425 ntBASIC4.11□□□□□ -1.75
NUP98P52948 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.11□□□□□ -1.75
NUP98P52948 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
NUP98P52948 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.11□□□□□ -1.75
NUP98P52948 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.11□□□□□ -1.75
NUP98P52948 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.11□□□□□ -1.75
NUP98P52948 AC116158.1-201ENST00000560231 2129 ntBASIC4.11□□□□□ -1.75
NUP98P52948 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.11□□□□□ -1.75
NUP98P52948 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.11□□□□□ -1.75
NUP98P52948 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
NUP98P52948 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
NUP98P52948 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
NUP98P52948 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.1□□□□□ -1.75
NUP98P52948 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NUP98P52948 RNU4-47P-201ENST00000410876 114 ntBASIC4.1□□□□□ -1.75
NUP98P52948 TRGV5P-201ENST00000419915 354 ntBASIC4.1□□□□□ -1.75
NUP98P52948 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
NUP98P52948 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.1□□□□□ -1.75
NUP98P52948 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.1□□□□□ -1.75
NUP98P52948 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.1□□□□□ -1.75
NUP98P52948 CR383656.14-201ENST00000551951 406 ntBASIC4.1□□□□□ -1.75
NUP98P52948 AC027807.1-201ENST00000559921 996 ntBASIC4.1□□□□□ -1.75
NUP98P52948 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.1□□□□□ -1.75
NUP98P52948 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.1□□□□□ -1.75
NUP98P52948 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.1□□□□□ -1.75
NUP98P52948 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.1□□□□□ -1.75
NUP98P52948 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NUP98P52948 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NUP98P52948 KPNA2P2-201ENST00000419546 1489 ntBASIC4.09□□□□□ -1.75
NUP98P52948 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.09□□□□□ -1.75
NUP98P52948 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.09□□□□□ -1.75
NUP98P52948 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.09□□□□□ -1.75
NUP98P52948 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.09□□□□□ -1.75
NUP98P52948 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.09□□□□□ -1.75
NUP98P52948 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.09□□□□□ -1.75
NUP98P52948 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.09□□□□□ -1.75
NUP98P52948 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.09□□□□□ -1.75
NUP98P52948 RPL27AP5-201ENST00000469428 449 ntBASIC4.09□□□□□ -1.75
NUP98P52948 AC037198.2-201ENST00000478845 733 ntBASIC4.09□□□□□ -1.75
NUP98P52948 SYT14P1-201ENST00000481459 721 ntBASIC4.09□□□□□ -1.75
NUP98P52948 AC098799.1-201ENST00000504752 800 ntBASIC4.09□□□□□ -1.75
NUP98P52948 RNU6-964P-201ENST00000516524 69 ntBASIC4.09□□□□□ -1.75
NUP98P52948 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.09□□□□□ -1.75
NUP98P52948 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.09□□□□□ -1.75
NUP98P52948 AC093732.2-201ENST00000607950 274 ntBASIC4.09□□□□□ -1.75
NUP98P52948 AC243756.2-201ENST00000618406 463 ntBASIC4.09□□□□□ -1.75
NUP98P52948 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
NUP98P52948 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
NUP98P52948 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.09□□□□□ -1.75
NUP98P52948 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NUP98P52948 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NUP98P52948 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.09□□□□□ -1.75
NUP98P52948 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.09□□□□□ -1.76
NUP98P52948 AL645568.2-201ENST00000432815 1337 ntBASIC4.09□□□□□ -1.76
NUP98P52948 MIR1289-1-201ENST00000408836 144 ntBASIC4.09□□□□□ -1.76
NUP98P52948 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.09□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms